# Flexible, Extensible, & Reproducible Pupillometry Preprocessing

## Documentation for package ‘eyeris’ version 2.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

bidsify | Save out pupil timeseries data in a BIDS-like structure
bin | Bin pupil time series by averaging within time bins
deblink | NA-pad blink events / missing data
detransient | Remove pupil samples that are physiologically unlikely
detrend | Detrend the pupil time series
downsample | Downsample pupil time series with anti-aliasing filtering
epoch | Epoch (and baseline) pupil data based on custom event message structure
eyelink_asc_demo_dataset | Access example EyeLink .asc demo dataset file provided by the eyeris package.
eyelogger | Run 'eyeris' commands with automatic logging of R console's stdout and stderr
eyeris_color_palette | Default color palette for eyeris plotting functions
glassbox | The opinionated "glass box" 'eyeris' pipeline
interpolate | Interpolate missing pupil samples
load_asc | Load and parse SR Research EyeLink '.asc' files
lpfilt | Lowpass filtering of time series data
pipeline_handler | Build a generic operation (extension) for the 'eyeris' pipeline
plot.eyeris | Plot pre-processed pupil data from 'eyeris'
plot_gaze_heatmap | Create gaze heatmap of eye coordinates
summarize_confounds | Extract confounding variables calculated separately for each pupil data file
zscore | Z-score pupil timeseries data