Package: RapidoPGS
Title: A Fast and Light Package to Compute Polygenic Risk Scores
Version: 2.3.1
Authors@R: c(
    person("Guillermo","Reales", role = c("aut", "cre"), email = "gr440@cam.ac.uk",  comment = c(ORCID = "0000-0001-9993-3916")),
    person("Chris", "Wallace", role = "aut", email = "cew54@cam.ac.uk", comment = c(ORCID = "0000-0001-9755-1703")),
    person("Olly", "Burren", role = "ctb", email = "ob219@cam.ac.uk", comment = c(ORCID = "0000-0002-3388-5760")))
Description: Quickly computes polygenic scores from GWAS summary statistics of either case-control or quantitative traits without parameter tuning. Reales,G., Vigorito, E., Kelemen,M., Wallace,C. (2021) <doi:10.1101/2020.07.24.220392> "RápidoPGS: A rapid polygenic score calculator for summary GWAS data without a test dataset".
License: GPL-3
Depends: R (>= 4.3), data.table, RCurl, curl, magrittr
Imports: dplyr (>= 1.1.3), GenomicRanges (>= 1.52.0), IRanges (>=
        2.34.1), bigsnpr (>= 1.12.2), coloc (>= 5.2.3), bigreadr (>=
        0.2.5)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2025-02-19 11:42:09 UTC; gr440
Author: Guillermo Reales [aut, cre] (<https://orcid.org/0000-0001-9993-3916>),
  Chris Wallace [aut] (<https://orcid.org/0000-0001-9755-1703>),
  Olly Burren [ctb] (<https://orcid.org/0000-0002-3388-5760>)
Maintainer: Guillermo Reales <gr440@cam.ac.uk>
Repository: CRAN
Date/Publication: 2025-02-19 12:10:02 UTC
Built: R 4.4.3; ; 2025-11-01 04:52:23 UTC; windows
