0dee60a1a4c9d4144f52a40923bb6e97 *CITATION
62f1d4990169f0880bbd47ff1082cee6 *DESCRIPTION
d1029bae68b758c659e8e526627c5b32 *INDEX
f41e0d8613811a21720e37351cdce798 *Meta/Rd.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
9d87fc2975b1eb81d9b138c59cf58b42 *Meta/hsearch.rds
35407a79d50400aa7e3a7498166ea246 *Meta/links.rds
9fc470fb9cbb370b9c22abc1d69fb52a *Meta/nsInfo.rds
2b632e74b8d0bbc2a13702a93cf41502 *Meta/package.rds
019bfae583b9c415cfc0980e414a3cf7 *Meta/vignette.rds
df06ed7b61c5ae0468472fad8dcf7c8a *NAMESPACE
934e2839ac179f85729a272bff06d7cd *NEWS.md
d6c68f1fe41ced6e98a766a3757313da *R/jointseg
e78d476aa7d10269f5bba5df9b9dd6dd *R/jointseg.rdb
af626eddb129a8cf81fe2554161b2028 *R/jointseg.rdx
55e59209c255eb9fb3298214b68eb10e *doc/PSSeg.R
0371e3e830e8a895d2e44f504219f9ed *doc/PSSeg.Rmd
bcfd22c48ce544d48f68fcee3841cf1f *doc/PSSeg.html
c06014c2711b53ebd23abb38c1f42660 *doc/dataGeneration.R
07ea58d65830e9a010f0f00ee0f367fa *doc/dataGeneration.Rmd
b244801e92d6768a7d941ff072ef26e4 *doc/dataGeneration.html
2d5cf441261af9d9d16cd7ec43444e0d *doc/index.html
5eb60346221e1a0e64be593e79edd3b9 *eval/GSE11976/00.setup.R
33d3f122044f34134f4e42a85590b9db *eval/GSE11976/01.createDataSets.R
ddbcea24ceb0a98cb7551fd9bf7e82b2 *eval/GSE11976/02a.RBS+DP.R
cf6bd3e00445b5824e24342bcea7e40d *eval/GSE11976/02c.cghseg.R
e68189612a9a966abe638754b2fbd3c8 *eval/GSE11976/02d.CBS.R
a5246bad3ee210334ba426574e4211cb *eval/GSE11976/02e.PSCBS.R
a76375a894f9e71f4e4044478837d2a5 *eval/GSE11976/02f.GFLars.R
bc237341fb1eaaccd4760a239e8a4625 *eval/GSE11976/03.perf.R
861cc155c17add871b2238abeb018513 *eval/GSE11976/04.pAUC.R
937ef4eeded0f01ed2a708f0ebd61ec6 *eval/GSE11976/05.pAUCcurves.R
0fe3b1fd9b2105d0f4ca6724f5aa6abd *eval/GSE11976/06.pAUCtable.R
b6dd68cae4936541810e0b9ccf13d7f9 *eval/GSE11976/SnrForCaughtAndMissedBkp.R
61151018c12a8d686a05aa90a7c55583 *eval/GSE11976/myImagePlot.R
9229147abda9e370fd4652ae303a06ac *eval/GSE29172/00.setup.R
7111c0126bf396d292aa09b365596841 *eval/GSE29172/01.createDataSets.R
b5b42a666caa4de85708e4f6b0f9defd *eval/GSE29172/02a.RBS+DP.R
0dbd8a717d0797f6df37ec38ba925509 *eval/GSE29172/02c.cghseg.R
7e8577834e4f6af6da3c391236b4eba2 *eval/GSE29172/02d.CBS.R
382d8715832da483caa2be0c2ac47642 *eval/GSE29172/02e.PSCBS.R
3a791f9ebd40c2f50b5aa419b6552033 *eval/GSE29172/02f.GFLars.R
cd644ec2205637d7e0ab7f3ddd45ca41 *eval/GSE29172/03.perf.R
c2c1d7e91efce9604306c5acba513983 *eval/GSE29172/04.pAUC.R
27e2a5e6edcc91427642d2e6003483b2 *eval/GSE29172/05.pAUCcurves.R
0fe3b1fd9b2105d0f4ca6724f5aa6abd *eval/GSE29172/06.pAUCtable.R
29a840b607f753a3e124aa0ce369778a *eval/GSE29172/SnrForCaughtAndMissedBkp.R
5c7a5762381a653299c02ca5eb558633 *eval/GSE29172/myImagePlot.R
2e9065ed5f629521a95a08bce1d26320 *figures/SNR.R
b8a6775e2f72a16b02d7da6d0e0e04e7 *figures/cnProfiles.tex
81a1fa9dec6517692ed46f83b972ec9f *figures/copyNumberData.R
5e54c339510c0000d7aeca217975a307 *figures/evalTPFP.R
3abd730defc3245073ad949bc016874a *help/AnIndex
69769ace9942176cd0d95b217b7eaefb *help/aliases.rds
0eb86f526ab679599ea52091e0f847e1 *help/jointseg.rdb
c0996cbd3fae9e8be9a0cc984f4b32fa *help/jointseg.rdx
de5358b023fec18b9a776484984ffa50 *help/paths.rds
f4fa8ddc2bb864cb18421567e3983f51 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
31a6c17d5889ba54cc541b80c46c0985 *libs/x64/jointseg.dll
951c6cdf0ced47ef0d04033aa075f7eb *libs/x64/symbols.rds
7cf0fc6ab2f01558f0f00993f4dad7fb *otherMethods/ASCAT/doASCAT.R
a71fee701471285b9cdf89c6ed34c310 *otherMethods/ASCAT/downloadASCAT.R
4eda24bfb0f64092c8ace0186457120a *otherMethods/ASCAT/predictGG.R
0da62f9d3fa63573f4afa3e92807a0bf *otherMethods/ASCAT/runASCAT.R
f0364b90725f6b74a587d5d32adc26c0 *otherMethods/CnaStruct/doCnaStruct.R
450d0e4ddc2da90c980019c06b9d3fa7 *otherMethods/PELT/doPelt.R
805f60af19e84ecc88fe039767087cea *otherMethods/PELT/doPelt.Rnw
9706ccf72df147e67f45f053ead9c813 *otherMethods/PELT/jointSeg.bib
4fc133e2a41ba60fe7bd71d04389ddec *otherMethods/PSCN/doPSCN.R
576e5c1062b0f72c0f63862d2d833144 *syntheticProfiles/customRegionProba.R
141f73950466990ba59318c52d407f89 *syntheticProfiles/firestorm.R
1d3eb0d57a4734817a83e642b567e6c7 *syntheticProfiles/sawtooth.R
750d136d3be4c6edb19abe3bad594050 *time/00.setup.R
750d136d3be4c6edb19abe3bad594050 *time/R/00.setup.R
3dde4bdfb649545b2d14c150500cb37e *time/R/01.createDataSets.R
9cf527e7c9c9ea19533979d00fc88d4b *time/R/02a.RBS+DP.R
6d2073cfb4aa9bbdc2a3adfb28581f04 *time/R/02b.PSCN.R
8464e7b69446a2c0d1c6e279fcbf794f *time/R/02c.cghseg.R
2d1785c7a8f4d4647fa303eb84da4892 *time/R/02d.CBS.R
2637f32c2fee9f515c648dd08bfbe472 *time/R/02e.PSCBS.R
06d28fd63ba28809f5e3e3bf7cf8ad98 *time/R/02f.GFLars.R
0e1f1a9c8aba26603074e252fe63d213 *time/R/02g.CnaStruct.R
75347a197bf569c823241506cab46de9 *time/R/02i.DPSeg2d.R
793f39d6a5c8b1690ddf032e7e8c8b1b *time/R/Script.R
