8aafbe43fdd020425756432ae324cb31 *DESCRIPTION
27c8a15b6c80f0766cde662df996292b *NAMESPACE
d6065c66d1b93908beef98e48832f1d0 *NEWS.md
63981a2b23a3e06aa843a9543c625d52 *R/CalibrateSingleDetermination.R
8c598b9565c5b1619704bda8a47233b6 *R/DPMM_helpers.R
d33ab22d29f49d39eff5194866cf57dd *R/FindPosteriorMeanRate.R
9f8aa21d0c3f1e892bca4d772a1e0fc4 *R/FindPredictiveCalendarAgeDensity.R
a0ea358709080aed8ca39d0521a58b33 *R/FindSummedProbabilityDistribution.R
b1a4d237a7bc54076dd449c7341503a1 *R/GenerateOxcalCode.R
ca496aba4854535e407dbf0468a25f87 *R/InterpolateCalibrationCurve.R
8bec85cc91bdff28e1d8218fc324c9a1 *R/PPcalibrate.R
fa9ce2263f828e9c03d85e9708834dc2 *R/PlotCalendarAgeDensityIndividualSample.R
ec8798ffaa0d9070010d012de9c2cc16 *R/PlotConvergenceData.R
34931d01db11eac1bd5f2fbf4b49caf8 *R/PlotGelmanRubin.R
f889ffabe4bb8351b584a3e6d3699fca *R/PlotNumberOfClusters.R
2407523eba3071ca97fa2af8b697b4f7 *R/PlotNumberOfInternalChanges.R
81fe4fddd16f7405cb23f9fc2c2c7ac0 *R/PlotPosteriorChangePoints.R
2460972c08ea4736a376d5541d96dc26 *R/PlotPosteriorHeights.R
68881febdf49f47b2ca8803ef1e47610 *R/PlotPosteriorMeanRate.R
2c606204140b34a6ee84da694592a457 *R/PlotPredictiveCalendarAgeDensity.R
05a2bcd122ad9a12f70d8ad30436cbc1 *R/PlotRateIndividualRealisation.R
00ceed1c10c41c8eed88c1c793a2cc69 *R/PolyaUrnBivarDirichlet.R
73c4ca4c4301c0b79cc2c95135ee5879 *R/RJ_helpers.R
4c227b300ce4e8990357ca58871c2842 *R/UpdateCalendarAgesGibbs.R
6b888c3954ac44103d6cb250c9a2d25e *R/UpdatePoissonProcessRateRevJump.R
a68ed933adbb25e8c5a33c21b44b8002 *R/WalkerBivarDirichlet.R
66c1aff40e91b39d90135c0283b3acec *R/carbondate-package.R
8165f0fecbd3635f792d1a04403b9ffc *R/check_arguments.R
e6c3bc7bafae6e514cbc159e83f07aba *R/cpp11.R
f740df3b933e1e505c43ca7559020127 *R/data.R
4e6d7543acd3f931d32f2867951bff82 *R/plot_helpers.R
5f2e3986660929ae0e63e6ec1389d8bd *R/radiocarbon_scales.R
c852a67664359739a910e864e451bfea *README.md
d65b2191fc135f75a26c4cc7e1da2dbf *build/vignette.rds
c03771c841fd189356a49eb5df9157bf *data/alces.rda
9990ba8bde5b2fbea241a6d933a02025 *data/armit.rda
fec369a7cb2cb439566588c516139c6e *data/bison.rda
4eea2041257717edf77b2a5d85f5b779 *data/buchanan.rda
63c956908b58b0198aaf915038414f9a *data/cervus.rda
eccc35d4af2602bb129c2fbeb79d50a2 *data/equus.rda
4245d0a474a849547c4e00705fdfceb6 *data/human.rda
fbba3daa372b64b40c5484f8e90a04a1 *data/intcal04.rda
9cacdd2d8234be69db0d2d9e7987f279 *data/intcal09.rda
45424da78eb2695a7fe8b19e17ea3020 *data/intcal13.rda
f6b4eafca95460d1c35ea5224ef88982 *data/intcal20.rda
5f89a33ee58feb11b6a1773257bff0b9 *data/intcal98.rda
27ec897f38b8aa559b9e3621f04f376f *data/kerr.rda
527dda7de78762babc1981c0e492ba34 *data/mammuthus.rda
3444d02d43254b356bc9c3a83caa472b *data/pp_uniform_phase.rda
cc985799aa3e83306304d62f7301a498 *data/shcal04.rda
62835b45577e5f2186d9a2e4aac5ab73 *data/shcal13.rda
48aee59b16eabde6f20885a8082b1b5d *data/shcal20.rda
2390df9d2fd7290fe3b5a8f0d82988bd *data/two_normals.rda
69c510eff2eeaf313f18a1a8e346eabc *inst/CITATION
ee19b6984fa4529581d98d6cf96f2661 *inst/doc/Against_SPDs.R
97bc6fffb709e041458ef04ba0643e26 *inst/doc/Against_SPDs.Rmd
c89accf9bf90bb938957f75af9a21a4c *inst/doc/Against_SPDs.html
9f98bee74f74db38fd63ad3f4c8b35f0 *inst/doc/Independent_calibration.R
bcef150e071838b526e01200352baee9 *inst/doc/Independent_calibration.Rmd
f00b1ceb53bf50c0833b8f8dbc5efaa3 *inst/doc/Independent_calibration.html
2b539ba86920a1c737d9eacd99285bbd *inst/doc/Non-parametric-summed-density.R
2f3611d9373088fe584ae3570bf63488 *inst/doc/Non-parametric-summed-density.Rmd
c9d9ced7825cf7ceddce142f1138c80b *inst/doc/Non-parametric-summed-density.html
dca6cd85e9befa78979f9256d20cdefc *inst/doc/Poisson-process-modelling.R
d6821d5af8f167cda85980d871249335 *inst/doc/Poisson-process-modelling.Rmd
e4471730eace5ee566a8c650e6d68258 *inst/doc/Poisson-process-modelling.html
69e0439397fc2de03a713455c70c10e1 *inst/doc/carbondate.R
5c12b7f7d9f6b778bb78da88bea1dd94 *inst/doc/carbondate.Rmd
cb3c37e976a8e0a3a5b905b014629c8c *inst/doc/carbondate.html
20c81cbb6f50e84121f6200061aa5a2a *inst/doc/determining-convergence.R
b5e91d55619e7e9ea8195d4e3f8ab123 *inst/doc/determining-convergence.Rmd
9bad30537de4075955d68b12c2c9d54c *inst/doc/determining-convergence.html
746bcbf7106172e678dcd47cca33b89c *man/CalibrateSingleDetermination.Rd
fe54a1438909d5b638dff9ca0efc7cab *man/FindPosteriorMeanRate.Rd
c2c63cda652ddf37ea3e72954b4ca087 *man/FindPredictiveCalendarAgeDensity.Rd
6821bc90a61d1f48e9d0e2e1e622a58a *man/FindSummedProbabilityDistribution.Rd
7898260cefd2aac40de52a9147caef14 *man/GenerateOxcalCode.Rd
1c197ac1ad8105b37a9b3115641510f0 *man/InterpolateCalibrationCurve.Rd
122c6c840332eddf74c6c11bc6034151 *man/PPcalibrate.Rd
71e8a48c53f262b39b9a6ef1c10475ef *man/PlotCalendarAgeDensityIndividualSample.Rd
02544df0df48c17dbed8734567da4f72 *man/PlotConvergenceData.Rd
756fcec6af96027606915781aaff4bd2 *man/PlotGelmanRubinDiagnosticMultiChain.Rd
66e8636c832ebb8d9d34d83d4bff8abf *man/PlotGelmanRubinDiagnosticSingleChain.Rd
37bf7e47f38c84a2ded93489e15e7da6 *man/PlotNumberOfClusters.Rd
f07349d797959a766b58f53af971345c *man/PlotNumberOfInternalChanges.Rd
569a9b8182b713b7d9f8c497905796da *man/PlotPosteriorChangePoints.Rd
f082c7feb3203cb1cdc7f93059f74b2e *man/PlotPosteriorHeights.Rd
58a7cbb4277a2679050a72480ed5b9e2 *man/PlotPosteriorMeanRate.Rd
74d87bd2be8875f63d1608ad053344b5 *man/PlotPredictiveCalendarAgeDensity.Rd
3fabe6cea9b4fd406b3923916edf6d37 *man/PlotRateIndividualRealisation.Rd
98fd1a50bf56392a59bc0ff7d1ccffa4 *man/PolyaUrnBivarDirichlet.Rd
f67d853ea427806d9d69a1035809e6bc *man/WalkerBivarDirichlet.Rd
3f3d8393130281339dc7b31cacc98052 *man/alces.Rd
701f78f5f062ae0430d5756486a56e72 *man/armit.Rd
bd1028ec5f76154fd4a239ddb412b32c *man/bison.Rd
3091af74b2731404b008d0678c6d573d *man/buchanan.Rd
79da9eb2dc2a8eb0d02816f37a2b73a7 *man/cervus.Rd
58df1a0e33106aeb553bd81e6eddb9fd *man/equus.Rd
5dd94f0dd55e6061ace4e7a578319d98 *man/figures/README-calendar_age-1.png
f0c7996aa1074a101f80eebd9eca2a40 *man/figures/README-plot_density-1.png
abe3795d0f1f79c4ac7a3be570ae42d3 *man/figures/README-plot_mean_rate-1.png
1ead7fc0481e9de656d52128b5e9dd39 *man/human.Rd
d96b9b8d8c161665f625f658edd2fad0 *man/intcal04.Rd
b9ce30a84d17ae4bae1f99b7d3f5b523 *man/intcal09.Rd
de42fdc59db875af91e0ae4275b5c0f8 *man/intcal13.Rd
3efe5dcc46096e77875f606807213fdd *man/intcal20.Rd
ff042d4aba4b510353fa5392e6eef1f5 *man/intcal98.Rd
712b68c14729cde2d7fad48223a3c03e *man/kerr.Rd
4a0aaca57df46a291c8387565fa8e602 *man/mammuthus.Rd
9e483ec3c9170ff4508314edb9c01e3a *man/pp_uniform_phase.Rd
5ec337632f2f53769ed16483958bcc33 *man/shcal04.Rd
f90e1e77f769e10d7e9123d77609e7b2 *man/shcal13.Rd
8a71434517c8960de63d0ca04e566657 *man/shcal20.Rd
1e8a84d868d5760e56228fb787e39198 *man/two_normals.Rd
2766ebfef6950c24cbcd367f837511df *src/cpp11.cpp
be5d3e4eef19c51441159fc02c922568 *src/find_hpd.cpp
82d415d58fa0d8aa652b0ec425c9bf0e *src/find_predictive_density.cpp
f470207b3ecb7695c26c5020d76db085 *src/local_rng.h
5bc108227196e69abefde3bd781f0eb9 *src/polya_urn_update_helpers.cpp
aa6ce555f4bd723ad4a159757ca2a23b *src/polya_urn_update_step.cpp
952bac67354e3318b67b4fdc4ecf7393 *src/sample.cpp
6878f73a65c5840fd10dbd03b1967dbf *src/update_calendar_ages.cpp
a86b26734a1b237ac755bf3a282f1005 *src/update_calendar_ages_rjpp.cpp
18b78400390f92c5f12d242f377c8e29 *src/update_helpers.cpp
7444019d1cb0ca0025951c3b34569e9a *src/walker_update_helpers.cpp
3837d5a7a9972b3340768c595b4fd74f *src/walker_update_step.cpp
152751c8d2240c9f54f8f21fbabc2866 *tests/testthat.R
7354586f47b764c79e62345610ae1e53 *tests/testthat/Rplots.pdf
592db006451291505dd05c3fad71bd1d *tests/testthat/fixtures/LegacyBirth.R
640fb8e8878bc31d0db9a17e806c6c44 *tests/testthat/fixtures/LegacyCalibrate.R
9914e89ba7dac7c6bb62f221b58cf25a *tests/testthat/fixtures/LegacyChangeHeight.R
98f2ec9e1f02e6a673bc7db609b813a0 *tests/testthat/fixtures/LegacyChangePos.R
38c97231a1e7d3563c12141a748e280f *tests/testthat/fixtures/LegacyDeath.R
3f74c9a5d3374a31eeaf728c9e8630f2 *tests/testthat/fixtures/LegacyFindCalPrior.R
6a04d751e12cdce77e41897280d4278b *tests/testthat/fixtures/LegacyFindMoveProb.R
00e2ea6ce64d3c776bf3ae2931d5c466 *tests/testthat/fixtures/LegacyHelpers.R
2f9b3d4a54e230c0667bfdd46d045aa4 *tests/testthat/fixtures/LegacySingleRJUpdate.R
3e1c7c4f7eb0c1087177191c044dd899 *tests/testthat/fixtures/helpers/NealDirichletMixtureMasterFunctionsFinal.R
f0ed630e73dc6b7d69fa69a348fdd0fe *tests/testthat/fixtures/helpers/NealPostProcessingFinal.R
ea4f365056ef3b72858a250f98ddd315 *tests/testthat/fixtures/helpers/SimStudyFuncsFinal.R
71fce36f09b49fafc665f0a046488f2d *tests/testthat/fixtures/helpers/SliceUpdateFunsFinal.R
a5c414c1af903837c153039191b7e6dc *tests/testthat/fixtures/helpers/WalkerDirichletMixtureUpdateFunsFinal.R
572d55620b50bdac03b387ce89184084 *tests/testthat/fixtures/helpers/WalkerMasterFunctionFinal.R
d94ba22696adb1bd2bea7bd2a0c01d2a *tests/testthat/fixtures/helpers/WalkerPostProcessingFinal.R
0dd81bf871edb52645707a1a87e6f766 *tests/testthat/fixtures/helpers/intcal20.14c
9c66b8085279e5b08bd9896a5e5fb391 *tests/testthat/fixtures/helpers/kerr2014sss_sup.csv
845d65f77d2ec032b72d5207c7386d90 *tests/testthat/fixtures/make-polya-urn-output.R
84b34f3121376a7a1324c191ff85619d *tests/testthat/fixtures/make-walker-output.R
6cf260af7f8ebab42d1849c71297f1b0 *tests/testthat/fixtures/polya_urn_input.rda
d08218bc5887c9fe40f8a81224bcbfa4 *tests/testthat/fixtures/polya_urn_output.rda
9c6b87e53ee943e66777d6b2982b769b *tests/testthat/fixtures/walker_input.rda
69e565817ca6f566554bbecb9c734ee1 *tests/testthat/fixtures/walker_output.rda
41439d6b8ff75b69ac3893f7b62155f8 *tests/testthat/test-Birth.R
4f1586ad0d1d5ff1390625d66a8ba47a *tests/testthat/test-CalendarAgeLikelihoodGivenCurve.R
2afb94388a96e5e6defcb9a04605022c *tests/testthat/test-CalibrateSingleDetermination.R
e2270908964f7f91a8af0d65de73ed1b *tests/testthat/test-ChangeHeight.R
f961a5681f3ac24b15fed4f2b5c86b0f *tests/testthat/test-ChangePos.R
d8a3cfee604301f7da9cad5ca9c9a555 *tests/testthat/test-Death.R
d1660720d14977e769cc5288ce1f93a2 *tests/testthat/test-FindCalPrior.R
ab085634d5b06591bd481d7022ba6042 *tests/testthat/test-FindMoveProbability.R
cba4f164576a99bf3133a67d6b8fafc2 *tests/testthat/test-FindSummedProbabilityDistribution.R
544d597db25b5eac80ab3a8e6662dd4a *tests/testthat/test-InterpolateCalibrationCurve.R
216a85b21b75e0d179db2d35ac0c8cfc *tests/testthat/test-PPcalibrate.R
eb49ee2223d731a1419ab68e3df30dc9 *tests/testthat/test-PolyaUrnBivarDirichlet.R
4edf8b3cfd21ac26524d0e1b9e479fcc *tests/testthat/test-UpdatePoissonProcessRateRevJump.R
3c4140f530329cb036d743a57dfda48a *tests/testthat/test-WalkerBivarDirichlet.R
94e20f25e93084e1a777fb6c32854ba4 *tests/testthat/test-check_arguments.R
97bc6fffb709e041458ef04ba0643e26 *vignettes/Against_SPDs.Rmd
bcef150e071838b526e01200352baee9 *vignettes/Independent_calibration.Rmd
1f833764a7a406f01c395c840c9b7cb9 *vignettes/Non-parametric-summed-density-short.Rmd-in-progress
2f3611d9373088fe584ae3570bf63488 *vignettes/Non-parametric-summed-density.Rmd
d6821d5af8f167cda85980d871249335 *vignettes/Poisson-process-modelling.Rmd
5c12b7f7d9f6b778bb78da88bea1dd94 *vignettes/carbondate.Rmd
b5e91d55619e7e9ea8195d4e3f8ab123 *vignettes/determining-convergence.Rmd
83e25586e25e90954961cb19a5a9d83f *vignettes/figures-convergence/calculate_gr-1.png
decda4b35be923a1969ec316ffe4b692 *vignettes/figures-convergence/calculate_gr_multiple-1.png
7448f06d341305d5b1a221341aa5e8e6 *vignettes/figures-convergence/calculate_kld-1.png
e0b6c7716b263d98eae5170f600c22e5 *vignettes/figures-convergence/calculate_polya_kerr-1.png
1c31ddbcf903b8a9091b8ac977f1caf7 *vignettes/figures-convergence/calculate_polya_normals-1.png
08d16f68dc60873cd5eaff061bf508eb *vignettes/references.bib
