2e9c9ea4a4a30d633ede2eb07cac2775 *DESCRIPTION
af51f8abc43da7fb2819bbf434568831 *NAMESPACE
90b8e96734a4c56691e39857317ef5be *NEWS.md
48485e99fe42aa59ce21b3ff8964efee *R/classify.R
afc8ae346c18517aae23a3578af903ac *R/find_knn.R
5cc540bd88e2d25450f64a4ca116c279 *R/neighbor_pooling.R
48ce990d5845dcfb04082d7febf8ad2e *R/plots.R
473a157c1330c09f5747b0db26a0761c *R/pseudobulk.R
67e1da4de3a64001260dd0ef6d07e243 *R/pype_from_seurat.R
24b8b4a212b5afb7edde1209b80ec28b *R/pype_rule_template.R
ce95f531c019899b4d96acdfa55ec7a8 *R/rule.R
06ce766513b38f971aaaf379f153d3fa *R/simulated_umis.R
75bd76b651fbf92122ef0aeea2f5409a *README.md
0de1b570ef81b0d65c71c45ab368afbf *data/simulated_umis.rda
f3e30199a87e415188e73b913b546930 *inst/CITATION
2ca25ea5c181602a585458c73579834a *man/class_to_deseq2.Rd
b36dc806d09bd191ec1271e0351a2ed2 *man/classify.Rd
4a777be94f42c8c40a871bcf44a63755 *man/evaluate_rule.Rd
aa4e22d9b320b4b07070ac72c2a56bec *man/feat.Rd
27a5e42ec65763480330880302b5aa86 *man/figures/01_CD3_MS4A1.gif
838ed981b2bc17a958020e2e5596223d *man/figures/02_hierarchy.gif
89ecc118ddbb8bfc3564ecd630f5473f *man/figures/README-feat-1.png
4d6c536de07fbae789b0a0f0d3a69b79 *man/figures/README-pbmc2700.jpg
477a399d3b74bf62ba2529afa7bad245 *man/figures/README-pbmc_cd3e.png
1392f7dd088ef56c2c3f7bd084f0693b *man/figures/README-pbmc_rules-1.png
395d2bc60eac43cefcf4628ff914bb0b *man/figures/README-quickstart-1.png
ddb84356830b33ca5f0b17a1fde896c5 *man/figures/README-unnamed-chunk-5-1.png
dff8b698d673df49caa84bdb08e518bc *man/figures/README-unnamed-chunk-6-1.png
1560fdbcb7b6e3fa581c04dc52428203 *man/figures/README-unnamed-chunk-6-2.png
340019b8ada001101bfb46b4aa89d861 *man/find_knn.Rd
61447f3ca804f98b5c7bdbb2a77ca2df *man/is_classes.Rd
68321eaa332707e1449b1c7fa2f8d215 *man/is_rules.Rd
b640652bf05e76fb40e8d6c8f5d7947c *man/knn_refine.Rd
ec3cc66a16d35773754c550ed2f1b994 *man/plot_classes.Rd
fc85c7de6b7bb78ca5415e33b85a25ae *man/plot_last.Rd
240c0167e6165d6dbfe27a7322f29235 *man/pool_across_neighbors.Rd
c7e216e00819c20b32bcf47be40efc73 *man/pseudobulk.Rd
75e2ca0a0194c078bf6812b2859deac4 *man/pseudobulk_id.Rd
6979bb980222a1d60c42b723b6defa75 *man/pype_code_template.Rd
a4a93e1267714b766fe8d8c6aaa3eaa8 *man/pype_from_seurat.Rd
7d92107ec9a9f1fe2bda3bd2bac48f56 *man/rule.Rd
4d2fee1ea3a9db5a29a58d1f5993f025 *man/simulated_umis.Rd
bcea1ec7dd2e09c205ce15b09364220b *man/tree_ancestry.Rd
12c541b3c51e5fb372daa364e212d01f *man/tree_descendants.Rd
f5b3648c1d9bde262759507ab41e4bc7 *man/tree_leaf_nodes.Rd
58feec9a3185590065acb325cecf47ca *tests/testthat.R
1f74e76950638002ea3ff0f107431194 *tests/testthat/Rplots.pdf
c69b56f6bc357b4263e9c0f470b98d0c *tests/testthat/test-classify.R
f0f1c8c174a6132db09a34a1be599d94 *tests/testthat/test-find_knn.R
330a2098d61e35bb01d73f9743fd883a *tests/testthat/test-neighbor_pooling.R
43726ebe7c343cc8f9cc986ca253ef7b *tests/testthat/test-plots.R
174afe2e30af9e842b8c792db34e22e0 *tests/testthat/test-pseudobulk.R
68332a4301169804f194680ff1dbe9a2 *tests/testthat/test-rule.R
d9e36732798d9106fd229ebf0d3d9fa4 *tests/testthat/test-tree_leaf_nodes.R
