8524a9d6c260fff73919a0e2c2cd5aea *DESCRIPTION
428b827a48b4aee1390837a291fb6ba4 *NAMESPACE
e41d5a57a782db4ca8a6860c1436662a *R/AFNI_IO.R
12f307027a1b255a8dd89693edb81d71 *R/AllClass.R
d9880a9be41ddb807ea02e557b24ee71 *R/AllGeneric.R
6ad6c6c42efc8d263c29e242ed97759c *R/Axis.R
249e1a6c79335bd3f2493cc3635151ed *R/BinaryIO.R
168415f24284e9828d97e2dc1ad50261 *R/BrainData.R
b7df7dbbdeb2e422d6811a9d2fe74b0d *R/BrainFileDescriptor.R
026c36bf2f425d2f13812fe38cde2ac3 *R/BrainMetaInfo.R
e02bc97f033d664f1ca61867b9dd17f6 *R/BrainRegion3D.R
4f56d00526d9dd00f23cdc6248e29228 *R/BrainSlice.R
1421b22b9ad3e9317046339b88adc33c *R/BrainSpace.R
78d84157fdbef6ab9c80668b41cc4c2f *R/BrainSurface.R
1da9ad1308bfe8043cf98d5b01422ec6 *R/BrainVector.R
e84cb0a8aebcc389746870f2a6a294d6 *R/BrainVolume.R
dd8558bf6f8a295a729e33fd4aed3673 *R/Display.R
4bb54e881fdd908fa0913de66cfcf7d3 *R/FREESURFER_IO.R
be6db4cf7efcab598383c81a0df46de4 *R/IndexLookupVolume.R
6e39efd02e7bee9b309efb0a200bc3b2 *R/NIFTI_IO.R
eb9bf2417dd2e9de0d77075abbe1643c *R/Ops.R
d5eefb21f6285879fea09a16310d9d97 *R/RcppExports.R
0321f50f82cee8e6c9b46b9610418dc5 *R/SparseBrainVector.R
a82a7dd1462c70b5bf9cf5bf7b36feaf *R/common.R
b1111c3ab70d95147f53409c0f4980e7 *R/conncomp.R
6bc1bc18387dc3d8309aac01955339e9 *R/datadoc.R
25c05fa88661e8a7589df1c12548892f *R/neuroim.R
87038087d00110bbaae3372bcb80a860 *build/vignette.rds
8d0c9bdfa4182d2a19db4eb532151cad *data/MNI_SPACE_1MM.RData
b33734232e54b2e3b1a521a61e7e3b38 *inst/doc/FileIO.R
23732c3fd0886868ddc3e94455460d24 *inst/doc/FileIO.Rmd
3bf133383e8c51d3d4ed11ff8b1cd37b *inst/doc/FileIO.html
8bad4b3c1f7fa77775fccb20d0593084 *inst/doc/neuroim.R
bc355c823772c8fd88e4fff793d221a0 *inst/doc/neuroim.Rmd
5b47ea52be57ca7f012d987b2365aa46 *inst/doc/neuroim.html
bd8e447e2ac8b6d0c55ca70efa5dc002 *inst/doc/regionOfInterest.R
ee8af88117f27e1f93dce4edad84e8e3 *inst/doc/regionOfInterest.Rmd
a5969cdecc126c92c365a1d0ea15e77f *inst/doc/regionOfInterest.html
fb14f6862838b57f8972911237767f44 *inst/extdata/global_mask.nii
5692a8fafa5dc17bd11deb11eb09fe79 *inst/tests/test-indices.R
47cc23efeddc754b74656569fbb84358 *man/AFNIFileDescriptor-class.Rd
797719d287633464d44e33a660d3b7ed *man/AFNIMetaInfo-class.Rd
568a2f17bddd580d5f7ef0dc396df320 *man/AxisSet-class.Rd
c885a3d524043f5c7a3c87ceecf7ea91 *man/AxisSet1D-class.Rd
0b079aa4efe01386a79fd967ddc53df1 *man/AxisSet2D-class.Rd
a174aedfc318c1e7d41bb3d6cd26a941 *man/AxisSet3D-class.Rd
fba13d756efbd858e27a8abb453ec5cc *man/AxisSet4D-class.Rd
26f6a17bc80cdcd92a6869ce7d7f54ae *man/AxisSet5D-class.Rd
f4eeb0acc0783d54a03222914b8b3836 *man/Base-class.Rd
850ae9b1e564952e0a973820e2c54720 *man/BaseMetaInfo-class.Rd
c9b02c2529096662032f74f4a8aaa0ff *man/BaseSource-class.Rd
87e1ca4bc1a2c324bfca1790ade2898e *man/BinaryReader-class.Rd
8ebe97a828a4cb4f6ca5833bda122f2b *man/BinaryReader.Rd
494e25ea98212ad89de844ce180b2a8c *man/BinaryWriter-class.Rd
e9dbc715704e5c40954a117f0abbaedc *man/BootstrapSearchlight.Rd
af73dc58173266b4763782c2ee0f1de9 *man/BrainBucket-class.Rd
ff09e0fcfdd02dc23ed44400a42d5521 *man/BrainBucketSource-class.Rd
228f38d3cccc7f0e0bcc8a628a42ce11 *man/BrainData-class.Rd
b741126790d6a3ff5fd6882060bdb42f *man/BrainFileDescriptor-class.Rd
43e2f712c65b1c2a04c876b901699c1a *man/BrainFileSource-class.Rd
6e2afb27d2c90117f95f632aab64d8d9 *man/BrainMetaInfo-class.Rd
09f9b5c5300fce83ab0763088fd2bd5c *man/BrainSlice-class.Rd
98e88e21ee0f9b783f9f135c41e20641 *man/BrainSlice.Rd
414098c608ca731f117cdcdb62437edc *man/BrainSource-class.Rd
db82ee2cc75f774c9e152652aab62c07 *man/BrainSpace-class.Rd
55fc336d49e78f3ab5dd0b8de240f995 *man/BrainSpace.Rd
f2906386f3146bc4112af1eda545970b *man/BrainSurface-class.Rd
2eeba6a1d4cbc76aa6ebce318f511f65 *man/BrainSurfaceSource-class.Rd
27619f36bbbc173ff29579537adb1c6d *man/BrainSurfaceVector-class.Rd
b8ee5b1950914b1413661d51c3b7ac37 *man/BrainSurfaceVectorSource-class.Rd
682007635724842238b343ab0f6cc6a8 *man/BrainVector-class.Rd
7e49c7a14e182f22983ffa36e16a1ca3 *man/BrainVectorSource-class.Rd
eac8a1c4472be4cb6d1493e2201c4192 *man/BrainVectorSource.Rd
e950b43ea3ce7fdafdc5f2caa5b63144 *man/BrainVolume-class.Rd
682596f49e9825f92492ef5bba0d6926 *man/BrainVolume.Rd
dea575f78e5ac55d9f84b8599713e431 *man/BrainVolumeSource-class.Rd
4b07f7bdc1c645ad626cd68168264b8d *man/ClusteredBrainVolume-class.Rd
bb9b28e865e912a97f9670a55ab807ff *man/ColumnReader-class.Rd
41052e2364119c9f41660c87d715ec58 *man/ColumnReader.Rd
f51d9cd157c4df9358121762c005a160 *man/DenseBrainVector-class.Rd
ff78cf5b3344f784fe016c4e1727d1f0 *man/DenseBrainVolume-class.Rd
211cfcd706a6dbf759ec3db2c9320b91 *man/FileMetaInfo-class.Rd
fcd082ec54b4fd8fe3290cfc223848c2 *man/FreeSurferSurfaceGeometryMetaInfo-class.Rd
0d6d9b68364c02a9fc5cf60f88bec3d9 *man/FreesurferAsciiSurfaceFileDescriptor-class.Rd
40706ee76fad455a175456814af34abe *man/IndexLookupVolume-class.Rd
475490ee2408045067569efb777d94d9 *man/Kernel-class.Rd
b687c0bf548d9d526154c4d8b4034cb3 *man/Kernel.Rd
76d008a3784e0c2cb841f0778a8a6790 *man/Layer-class.Rd
a69c5d3277d707e74561192c2a1ed248 *man/Layer.Rd
aadf7e431ec76243732d9cd5159a95a7 *man/LogicalBrainVolume-class.Rd
18be0107c434f4235c13b0a8bd351ea3 *man/MNI_SPACE_1MM.Rd
e361444b3910ae32af8a516ff5aa97f3 *man/NIMLSurfaceDataMetaInfo-class.Rd
b42396280f31c17cbf2f78d49abc5da8 *man/NIMLSurfaceDataMetaInfo.Rd
8a5b73acbec333d95f9d5fc9beaa28ff *man/NIMLSurfaceFileDescriptor-class.Rd
17001feb2ddcd1f0a34a02ffb767a633 *man/NIfTIFileDescriptor-class.Rd
9c55a34ca5d1ec368c74d9d82ba94b99 *man/NIfTIMetaInfo-class.Rd
89cb543f38841a591c3cf6185d4b07d4 *man/NamedAxis-class.Rd
409dd4b8b8a88a48b9cf0910df08de95 *man/NullMetaInfo-class.Rd
cf25c4b147717f88d35ab9163a0447be *man/ROIVolume-class.Rd
daa2fb62fc41814b1b7c41879eaf0eb2 *man/ROIVolume.Rd
33e3a7837aaf5c0b97881f96bd46d9d0 *man/RandomSearchlight.Rd
7cf91c748e665296edc624ec1c3264ab *man/RegionCube.Rd
f2d8990418d45e7c85876e25be8120e1 *man/RegionSphere.Rd
90d3e3991b83b9bec93d51b6b18df1fb *man/RegionSquare.Rd
ed514d0015089dd513b9fe5b044e5763 *man/Searchlight.Rd
c4eb9b45ae2432fdc59316f57a55c4dc *man/SparseBrainVector-class.Rd
8a898594a1b771516add816ae4df2d9a *man/SparseBrainVectorSource-class.Rd
a0247ab044d5e27df84d269c7ffe9f90 *man/SparseBrainVolume-class.Rd
0950a028c004cad11f42583f2e0ba58e *man/SurfaceDataMetaInfo-class.Rd
60ce9750f030baa537e48ebd01bb9e27 *man/SurfaceDataMetaInfo.Rd
80b033fb60dd4c8354d32c18a06b319b *man/SurfaceGeometryMetaInfo-class.Rd
65b039fed6bdfa0feb356c538b873a48 *man/SurfaceGeometryMetaInfo.Rd
9c57773d304772cd99b8959d577eded3 *man/addDim-methods.Rd
47cab8f3e9ea64de88a564795565c593 *man/as-methods.Rd
8877e263422f6becf858f7ff6c9cd79d *man/as.array-BrainData-method.Rd
487ab400da09b43193c9dccadf91bf51 *man/as.list-methods.Rd
7ada86c372534edb7357ad088e2a38bc *man/as.logical-methods.Rd
d24445069a42e7ad0d28caab4f2cca18 *man/as.mask-methods.Rd
8be3639c5613a91657f8678507a2408b *man/as.matrix-BrainData-method.Rd
831ac4711c4545d22fa710cad640aa51 *man/as.matrix-methods.Rd
941a080e01f9e67b40f50d4a8e436193 *man/as.numeric-methods.Rd
b3d313ae9ae17360dc27a5e2353769ee *man/as.raster-methods.Rd
e92c4e20b0c2c32a4f1652cc75fee867 *man/as.sparse-methods.Rd
cd312967df5ec824cd35db95a52a630f *man/as.vector-BrainData-method.Rd
391cbdea8f585e57925267181ae4b5da *man/axes-methods.Rd
58e71c00152db015ed351d53bbf04d7d *man/axisToIndex-methods.Rd
e5911e95ef699838544331d5995709c8 *man/bounds-methods.Rd
5df2754fab9d5782a004781ea4fe8b6b *man/close-methods.Rd
b79bbb72bd89b1ef3caa9f85671742e7 *man/clusterCenters-methods.Rd
022b2af24fe1d441a6b13b0394307126 *man/concat-methods.Rd
14edd50f162404646f46e49d2341a8df *man/connComp-methods.Rd
4a67f84b971f0e22773eb79963784378 *man/connComp3D.Rd
d472a950ac14e1afa6c8772db5ca56be *man/coordToGrid-methods.Rd
dfd2afb45bdcf6197753b47334f346c1 *man/coordToIndex-methods.Rd
825aa9f88264852b79a9185cfefaf520 *man/coords-methods.Rd
df18baf80032abf34eb09b6eeaf5a0e0 *man/dataFile-methods.Rd
daffc93a78f5882ff230c9df3c3f59dc *man/dataFileMatches-methods.Rd
8cba7d7c8bbe12b6f39565ff2cd6824e *man/dataReader-methods.Rd
5b6718695313ac0a6d797f9cc5de551e *man/dim-BrainData-method.Rd
45fb50ff9967fb8a3f8cf24c439225c1 *man/dim-BrainSpace-method.Rd
ea07a41a32e28df5e537e1af2179bf19 *man/dim-FileMetaInfo-method.Rd
9263c79f82dac9853018f24e3d0b50ea *man/dropDim-methods.Rd
0bd70fc0f04dda533c56b6685aef89f3 *man/eachSeries-methods.Rd
cea5ce884defc128ecfb316e40bb0b69 *man/eachSlice-methods.Rd
b99c8da9490be775a5dc95bbf39d6c0e *man/eachVolume-methods.Rd
37f2939f1f8e17e27698aae30b107ebe *man/fileMatches-methods.Rd
3fa4ba6a1d8cf8615841541441cf2f19 *man/fill-methods.Rd
ef6232a47a4d7854f0e27e9579f72845 *man/gridToCoord-methods.Rd
f142b75166546fbc925312d90f4bef7f *man/gridToIndex-methods.Rd
c65c08fa192e6526d6bc9c6669343378 *man/headerFile-methods.Rd
c4123a719b41077693ccf05f4f4e857f *man/headerFileMatches-methods.Rd
e843f23f24a1d1cdc8e2a97ddc594afa *man/image-methods.Rd
da1fb6eae2ef495dde0ca820450a9221 *man/imageGrid.Rd
2f3c340d38b403bcf8c859ed0f1f1f88 *man/indexToCoord-methods.Rd
77ea92a1ae1f8e39aaca90ffea630340 *man/indexToGrid-methods.Rd
c80fb07041fa524ee0a4e19669962afd *man/indices-methods.Rd
7b699b7522c85732f0d47f1d319588d1 *man/internal-methods.Rd
75e302c49009ec465a0146a137fb5402 *man/inverseTrans-methods.Rd
766b1e84fae46cb808ab9bffc4c46a44 *man/length-methods.Rd
405b5e0b8a6cd3ac771359f54684f114 *man/loadBucket.Rd
b44272b5628c61fc98af525c5136ab1c *man/loadData-methods.Rd
50bdfa9296d644fcb73b9099cc5f0027 *man/loadFSSurface.Rd
1ce9012157751d9ea844036ac6f07eff *man/loadSurface.Rd
81c76dd46f7738544a771f055e985372 *man/loadVector.Rd
5f1b4e2204a09ab827a7caefb385973c *man/loadVolume.Rd
5093c0f3301cdeeb2d46bcc186fc619e *man/loadVolumeList.Rd
615c9c8a73bf675aff8b7fbaafa37d76 *man/lookup-methods.Rd
447b0afafe5ad67d6fa068900d09ce4f *man/makeVector.Rd
c3c98b5e7038a3a16c934957a34153dd *man/makeVolume.Rd
84387f0cfba1c79d686e2ead4cb0386e *man/map-methods.Rd
3cc75ac664956f521406299f6f4666b1 *man/mapToColors.Rd
fc1beff5ecbe11db5c4d0122ed857310 *man/matchAnatomy2D.Rd
403878060d42ea4fa6272e50317f2e01 *man/matchAnatomy3D.Rd
96614a08e208371bec0eced8659eacb9 *man/matrixToVolumeList.Rd
ce5d4248d4fc4caba7e1a1d4762b259f *man/mergePartitions-methods.Rd
3e941fed72fcd6e6fa8e3befeaaffa27 *man/names-methods.Rd
7e1145ac1310dea447e8c30a1497ac12 *man/ndim-methods.Rd
73b5f28b2171c1622a7f2e5418070cfa *man/neuroim.Rd
1ed7f739198bb59af6b02fee944cfbd9 *man/numClusters-methods.Rd
7782252fc5382ea3c7d04385ac19afd2 *man/origin-methods.Rd
42744ddfe73f2a10eabf19a0a7ff9bbc *man/overlay-methods.Rd
4450272122715e6c76bd1a5606973ec2 *man/partition-methods.Rd
680b3828c12417486f5cf71d7016f096 *man/permMat-methods.Rd
54146910a2cbbcb22d1849fce757dc7c *man/pick-methods.Rd
fe68c8c7c21e87f45855d775a34a6144 *man/print-AxisSet2D-method.Rd
3f94f4ff3dfbacbc2011fe7941e89ba4 *man/print-AxisSet3D-method.Rd
2c82e0f273f6ace5153fc71a0b1410e5 *man/print-NamedAxis-method.Rd
4a53d0aab54307e0b1d3b1b144cfce5e *man/print-methods.Rd
fcf23e4b230488ebfb6db02ba1a604fc *man/readAFNIHeader.Rd
c25905d2ac2f99b7f26705b525f19c15 *man/readColumns-methods.Rd
84d10b4dc32e0c38698a68d154d5f25d *man/readElements-methods.Rd
f47fd8510e0f5b068bbe14a1363535b5 *man/readHeader.Rd
9a1b71e64ff3f25f8166f1db73eb3454 *man/readMetaInfo-methods.Rd
7ce186159afac03c9c1a7570a892e58a *man/render-methods.Rd
f703319ddb1510f8ec5641ef861777fe *man/renderSlice-methods.Rd
6ea44e7a541b658f6ca12b60f93bde64 *man/scaleSeries-methods.Rd
1a692f92987fefb9f455676e5ed1ef64 *man/series-methods.Rd
03a620ad8065d1a5d70fb301ed1b5080 *man/seriesIter.Rd
86c1fb6f26e0f6310d0ad8141bd01a2a *man/show-AxisSet1D-method.Rd
018b197a420b1f6c86cd5703158acf16 *man/show-AxisSet2D-method.Rd
612d5cf844625a7dc0929b41640231a6 *man/show-AxisSet3D-method.Rd
091a26388e255c06c44c5d21981d62be *man/show-AxisSet4D-method.Rd
9812c1ee3c6a45b56fce4bfef869def5 *man/show-BaseMetaInfo-method.Rd
8d826ce52935b1275822b7bf482b834d *man/show-BrainSpace-method.Rd
bd6b176f591b8bfdf99edac046e71848 *man/show-BrainVector-method.Rd
b0616ac9672a290299c2fbb9f0f256ba *man/show-BrainVectorSource-method.Rd
a1b15527d28b647182b2a50448f2c0b7 *man/show-BrainVolume-method.Rd
a1f01cdea07038ec43f63620587d5464 *man/show-FileMetaInfo-method.Rd
82e96f5eedf6ae055d907fe7c56fd8c4 *man/show-NamedAxis-method.Rd
bce61b935e1bcf2b171d063cf9d95de2 *man/show-NullMetaInfo-method.Rd
59ff1dc74146bbeb8660af80db2a9ad2 *man/show-ROIVolume-method.Rd
53e6bdfa58435c3f8f5b0bcf70be9f3b *man/show-SparseBrainVector-method.Rd
1c862573ae87695b69a2368a4b23302d *man/show-SurfaceDataMetaInfo-method.Rd
f780226604aedc7cfd9054ad911f906c *man/show-SurfaceGeometryMetaInfo-method.Rd
8d3d5f14dea5858b32ce730aaff0370c *man/slice-methods.Rd
1c5185571fbc70b72b9224efb8fd09f9 *man/sliceData.Rd
05ae09dc0e3c3e2cff19fc197fe480e8 *man/space-methods.Rd
b81c6588d2db0b4050824f7b5aaf805c *man/spacing-methods.Rd
5abaa24b9625c4eb009127c2ee38f369 *man/splitFill-methods.Rd
521a53496371d96bb7cadb92ab40d417 *man/splitReduce-methods.Rd
97fa407bb8f6edbbc62fa30c9bf178da *man/splitScale-methods.Rd
a5b97ae868dfd772da42cae8aeeb6ea5 *man/stripExtension-methods.Rd
9ca4359df3f36df6e1b1edd984a12ff2 *man/sub-BrainBucket-index-missing-ANY-method.Rd
4f9288274f021a8efc56b889065d464c *man/sub-ROIVolume-numeric-missing-ANY-method.Rd
4371e31e8e2c68be22804794e7a923fc *man/sub-SparseBrainVector-missing-missing-ANY-method.Rd
53dca5ed8b44641737630f87166eb495 *man/sub-SparseBrainVector-missing-numeric-ANY-method.Rd
177985e54a93bb7e78d6fb68cc4e87df *man/sub-SparseBrainVector-numeric-missing-ANY-method.Rd
7d1858d01269675763276a1936c80bfe *man/sub-SparseBrainVector-numeric-numeric-ANY-method.Rd
19d49496ea2478f199270a7edac25c6c *man/sub-SparseBrainVolume-matrix-missing-ANY-method.Rd
b4fbd87c9ecedecc1d0ada09a723505c *man/sub-SparseBrainVolume-missing-missing-ANY-method.Rd
8720ee8090b37fed7b40848f8c6e8f05 *man/sub-SparseBrainVolume-missing-numeric-ANY-method.Rd
8c15419b291008c0c57bab3320861b18 *man/sub-SparseBrainVolume-numeric-missing-missing-method.Rd
301eb01b1943e2d093acebeb82ac81f6 *man/sub-SparseBrainVolume-numeric-numeric-ANY-method.Rd
dfab78b814369bed84759018c96364ea *man/sub-sub-BrainBucket-index-missing-method.Rd
406d16d8ff52c047c6365704821b3d88 *man/subVector-methods.Rd
c2faf086f0f965971c05069a568ad3b6 *man/takeSeries-methods.Rd
32b209debbf1fee4b4c3ce659253a60c *man/takeVolume-methods.Rd
8d5bd46ff7a3a81816daff376306ee12 *man/tesselate-methods.Rd
da2130e6c131e24bbd6b6deffd0b58d9 *man/trans-methods.Rd
8ff0a5925a64d9f8cdbc54ac01329b6c *man/values-methods.Rd
8952624bd89b986bf325ef6bf6bb7da7 *man/voxels-methods.Rd
3d0f337753d80af0d17f9a29321cf2bc *man/writeElements-methods.Rd
d069a0482556cf36e223c5599f66cd4e *man/writeVector-methods.Rd
12c5664ff4b24c9cb2c7f8863212b0f9 *man/writeVolume-methods.Rd
ce9284c837823921d56377e5e7b3851a *src/RcppExports.cpp
7b7466bc2c748c7cc34819ab138c2ce4 *src/indexFuns.cpp
618449d31a1cb6d8f2daaa5103ba8ee5 *tests/runit-BrainBucket.R
25da82cde17f35b85a9022bd7e232697 *tests/runit-BrainMetaInfo.R
b56c35c1dfe01a5e61cf7f0ee8382e55 *tests/runit-BrainVector.R
1d4c66bee2d25ecd802feb29df723150 *tests/runit-BrainVolume.R
3f4995b45868eb46cb666429b8f713d4 *tests/runit-connComp3D.R
2080833fe3fcb0b4688a61a4763d48dd *tests/runit-filtertest.R
cd87bd2118de940b8c85c06b562bd35b *tests/test-all.R
68363867c8f51573f40a77bb2f70449e *tests/testthat/test-roivolume.R
23732c3fd0886868ddc3e94455460d24 *vignettes/FileIO.Rmd
bc355c823772c8fd88e4fff793d221a0 *vignettes/neuroim.Rmd
ee8af88117f27e1f93dce4edad84e8e3 *vignettes/regionOfInterest.Rmd
