9d4ddae3cfd5692cf28a16aad7de6717 *ChangeLog
9379a88851eb9ddabba960901903185b *DESCRIPTION
3dfa054c71ecc86eb620e696c843159b *NAMESPACE
d0f8de405d5a94a68459bdf662d3ee61 *R/RcppExports.R
80d098723330f1b2f0556f4e327ad836 *R/add.leaf.R
00299ca719357b9bfe0b190ce2e7093f *R/compare.fitted.fstats.R
ea1686a3b6793c5b0ad0ef52b36114a6 *R/compute.F4ratio.R
34cc0bd57521116bf2ead5720bb0e7e1 *R/compute.fstats.R
8818ac1a76ff2eadde1c12b3fe5af342 *R/compute.pairwiseFST.R
774ce321ea3fab2ddba538ef4bd301e3 *R/computeFST.R
cd3a59851df8be0e7313410ca346c368 *R/countdata.subset.R
e9065f87a575627246022b1fd22a0711 *R/countdata2genobaypass.R
21a24978fb7b5c8add9bed5fe2258574 *R/find.tree.popset.R
ab41df2aaeae763897da026cbd5dd3ae *R/fit.graph.R
f77ac7f2f0bcd5cf36e9e2b5de170f9c *R/generate.graph.params.R
90ac9dbba7f8b4d015a14b1f6ef518cf *R/generate.jacknife.blocks.R
11f12c83682639173230b21bb8acd60d *R/genobaypass2countdata.R
0677565d444de7d2ecb5b87765bccf35 *R/genobaypass2pooldata.R
38afef0454229b3bd49e06d9e7b325a8 *R/genoselestim2pooldata.R
f42a318247a5d7ccab9f8f8e83b4dd72 *R/genotreemix2countdata.R
8a9c589604d79be9047b40ca80beb548 *R/graph.builder.R
888cdefb075ece12e2bd7ca22930b250 *R/graph.params2qpGraphFiles.R
05cca31417a12e925b22b2a7f43e7f40 *R/graph.params2symbolicfstats.R
f0a6815409dd92ba79c7a4e8ce05e640 *R/is.countdata.R
5be690ea5f492a5e7be0b67ca59a3bdf *R/is.fitted.graph.R
7ea54d0db958a5c8c1b9dd6039ee678f *R/is.graph.params.R
cd68d07429c34755376e9054ae8139c6 *R/is.pooldata.R
8000f74e582416e7d7f8fc255330c6b5 *R/make.example.files.R
db87c82d1b745684bc086f4f5ac697c1 *R/out.objects.R
f128df41bd042d119c1c0c445dad91bf *R/plot_fstats.R
b95d25203844369c629325a138ce9b9f *R/pooldata.subset.R
b4a4c1f95b79bc049c244a5d59ed6f46 *R/pooldata2diyabc.R
acb2d54024c3ae13a21f7dfbe66bb3e6 *R/pooldata2genobaypass.R
a15f9a418c018ced67144a5a3381ba71 *R/pooldata2genoselestim.R
0c93c7857b623f0d92cab6b858811fc7 *R/poolfstat-package.R
44696321fe117359bf7e8a35ea76c24a *R/popsync2pooldata.R
5b8d6d719b310fc2b014e74884ddf006 *R/randomallele.pca.R
92bcc870506baca09da03b8d85f6459c *R/rooted.njtree.builder.R
5e08dbe437311e1b44ae0500fd247480 *R/sim.readcounts.R
912673952ba705bce7031a1d832c596a *R/sliding.windows.fstat.R
98dc0fdf37b362d098f3cd8f208938d0 *R/vcf2pooldata.R
a12a0a1b8e8699218f4e07eecd9cb5d9 *build/vignette.rds
d7c4a63002e0f7e6930e8714de35840a *inst/CITATION
fbabf191da0f6c0565583ceff32fbf8a *inst/doc/vignette.Rnw
fc2664d1c6c96c310179fb0b114b1a82 *inst/doc/vignette.pdf
639adddc62b922fde532126ca2f32d1c *inst/ex.sync.gz
8ff7d9f354e64f5b79c583986c9cb7e0 *inst/ex.vcf.gz
453218cef6b6b3c7c575c766b39167e5 *man/add.leaf.Rd
d26ece24a762a2512780054d029536c7 *man/bjack_cov.Rd
e48b0992601823c1f0c2d55e996a52b9 *man/block_sum.Rd
397a4bd7384f1d40d3fecca17b4f7230 *man/block_sum2.Rd
008322c6fe4e9aa8ad53e18b188bc4b3 *man/compare.fitted.fstats.Rd
3f9d429796c069b79c1ca4b0066b9c40 *man/compute.f4ratio.Rd
2f85fc8b53c02d95903079b31d160b86 *man/compute.fstats.Rd
94e56fbfb489515100ea3da88569dd14 *man/compute.pairwiseFST.Rd
6bd508da4ec595a25e6c2adc5a503ad1 *man/computeFST.Rd
1010bb16a929dd662b3d6d578213a6c2 *man/compute_F3fromF2.Rd
347da20bf2f34e3133878122d8f6de91 *man/compute_F3fromF2samples.Rd
959f76b173dc3e2f6dac4d462f0ce1e4 *man/compute_F4DfromF2samples.Rd
453c703f08610ec638fbec63281330ff *man/compute_F4fromF2.Rd
ab1eaa8d06150113ff07e6ea5cc2e0c2 *man/compute_F4fromF2samples.Rd
0718f26c8a64aed49d31c8f73b674127 *man/compute_H1.Rd
68aefba9733f7658928c9d120c541207 *man/compute_Q2.Rd
d7006f555fc7a30be9b1f0a5c6e2d01f *man/compute_QmatfromF2samples.Rd
db0783f93a44e6c727a860e98299a836 *man/compute_blockDdenom.Rd
c3285585c53da4a23944147ed48420c4 *man/compute_snpFstAov.Rd
5aa0f47bb3a392e04c826e38d2b86d82 *man/compute_snpHierFstAov.Rd
8b09810b3b22078acab305db6c88853f *man/compute_snpQ1.Rd
c2a7727e84bf599404911329b1240bcf *man/compute_snpQ1onepop.Rd
1531a4f57e942e0a3224276d0fc61c57 *man/compute_snpQ1rw.Rd
a7402e5e3df97585045f6723d9cc473b *man/compute_snpQ2.Rd
83767646d5826be1e38a1e627549b66f *man/compute_snpQ2onepair.Rd
5a1f8636f6f1cec7a8af6baf4f505e84 *man/compute_snpQ2w.Rd
c380161324d63b215fe7465193d1453b *man/countdata-class.Rd
68e36a76380b0ce02c898293fa77518e *man/countdata.subset.Rd
991516d610ec82cf1e0c53be2061052f *man/countdata2genobaypass.Rd
a7375a8fb9a682018a9300ac47e424c8 *man/extract_allele_names.Rd
4774fdb05219475e656b76dc1c1d3498 *man/extract_nonvscan_counts.Rd
ba9583ae7792d178f0ae101d05556063 *man/extract_vscan_counts.Rd
3a46a35b0319c64166787aba6c532eb7 *man/find.tree.popset.Rd
da26e6ea66a17acb65574956ec34e661 *man/find_indelneighbor_idx.Rd
44bfbb64633532def42a2e8b90be3eca *man/fit.graph.Rd
f56c1c50725edad2cf36ab1ddd1df5bd *man/fitted.graph-class.Rd
9d4b2d1e802b16ecb00d0dace1fef97c *man/fstats-class.Rd
5e077fbb3c284e64693866138ba0ed3a *man/generate.graph.params.Rd
4900d6405dca75fc1ddfe0d3f9820b34 *man/generate.jackknife.blocks.Rd
e2c3431a1cd0960c067fba2f13189ff4 *man/generateF3names.Rd
b13335b982a376e82bef892708bc88a2 *man/generateF4names.Rd
0b87b569f963fb2b5e369850111af59d *man/genobaypass2countdata.Rd
3e9f02789cac988a74f2efa64c1123bd *man/genobaypass2pooldata.Rd
a1659663f83893bd31a2e9bb01b41514 *man/genoselestim2pooldata.Rd
b581ea2ece8f1c594c908420fe6a9891 *man/genotreemix2countdata.Rd
91310b852a1de6bb7e28b6625bfb2d07 *man/graph.builder.Rd
40064bb6251107900beeff241e22ccf6 *man/graph.params-class.Rd
e9fb0aa48de069e45ad0d0ca8ef8a9fd *man/graph.params2qpGraphFiles.Rd
5f965e2c07db00bc76f90d386a3fc4dd *man/graph.params2symbolic.fstats.Rd
808b9bbe080c6811d449fd9253ee1326 *man/heatmap-pairwisefst-method.Rd
4d0ede3dd8b9d8c1d506a6c265bd79a5 *man/is.countdata.Rd
b1f1db6d626d573832b43d4810f2ce82 *man/is.fitted.graph.Rd
c2c5ed697e59acb4b8584f774b35807f *man/is.fstats.Rd
efe7ab6cd541f21fd180190b2daf820d *man/is.graph.params.Rd
ab9d5f84bed030af8f8afd983d22f304 *man/is.pairwisefst.Rd
008484e01ad48a126502f113f44edbdb *man/is.pooldata.Rd
1ac82ff4683b7c3da06142a09e8ae69b *man/make.example.files.Rd
2e2fec2ecd0869b3a715a5ba29a22cb9 *man/pairwisefst-class.Rd
e4372d1ff8736981bee5ff5237bdd9b2 *man/plot-fitted.graph-method.Rd
d4d082e53b5c664023b82ec03c08382c *man/plot-fstats-method.Rd
37b4396e889caab9039c407750880fbf *man/plot-graph.params-method.Rd
58796cac41f7147c8ada386170c2b206 *man/plot-pairwisefst-method.Rd
05e291428efb143ffdfa841a048b3c83 *man/plot_fstats.Rd
0ddd0a718feef78113473bd22d981203 *man/pooldata-class.Rd
a87528739a7f077195c6b1cedc9de3a1 *man/pooldata.subset.Rd
d1b2b033e5c585758393bdfa601a5861 *man/pooldata2diyabc.Rd
03e3828b0391a7ecf281db14c79f00db *man/pooldata2genobaypass.Rd
d89d39af626cc98933a1771dfc2fc769 *man/pooldata2genoselestim.Rd
8d3482674e5c3e03810e4457ad73476c *man/poolfstat.Rd
3f069f9f5957c9af9491b7c579688853 *man/poppair_idx.Rd
3a9465eb3fa84397ef1aba7560c91b90 *man/popsync2pooldata.Rd
f93c7b60bad695dd200dc9a503c064de *man/randomallele.pca.Rd
8b4874f9041aa31c6e42cd577e63961c *man/rooted.njtree.builder.Rd
5ec016849a3a6a76ef29704b8f2c0a65 *man/scan_allele_info.Rd
cce2a9d822628109323e7ad163e3a4c2 *man/show-countdata-method.Rd
ea884c9a26c9391de77bd547f15d740c *man/show-fitted.graph-method.Rd
4469af410e878e60dbd4a87bd3cc7119 *man/show-fstats-method.Rd
63df2d681cd12e5c394c1935026a8b0c *man/show-graph.params-method.Rd
dc44a0c721e8f8bfa3e2462d3f7df421 *man/show-pairwisefst-method.Rd
38cba55d34edb3d10535316a049d557e *man/show-pooldata-method.Rd
a9dcff6bce6bc9c2d7142b5d5b00eaa7 *man/sim.readcounts.Rd
b8f3649e21d8c760dfc9505ec2d7c23f *man/simureads_mono.Rd
4fc81dc14b8aeebe9fd6b4c8a1a1c444 *man/simureads_poly.Rd
f1e7c88f04a0db202c49ae7a26b7730b *man/sliding.windows.fstat.Rd
bcb6172e4918ab4e33eb79bfab2038e6 *man/vcf2pooldata.Rd
1125319436c78aa4d46664b58dc75b69 *src/RcppExports.cpp
4bb1027b38fba90878bbd0008bfa46b5 *src/extract_counts.cpp
e7a1a2a2edafc465c31ad0fde18bde0d *src/fst_utils.cpp
ab5bd952fc36eaacb6b7425f96534fdc *src/fstats_utils.cpp
84c3b85d986b0d3b0c0385747a7f8cae *src/simulate.readcounts.utils.cpp
5f02dd4c69b0b19b9ac477c217a7b2fb *vignettes/poolfstat_vignette_6pops.pdf
fbabf191da0f6c0565583ceff32fbf8a *vignettes/vignette.Rnw
