2b67c25647a52d7565afb1da9c9c3062 *DESCRIPTION
818e5656f02a51ae91235e98403cb397 *NAMESPACE
4f1428a34a7862882c5b3982d42d2afd *NEWS
505f9cb4952757bf5c5facde331cf274 *R/data_checks.R
829a0f90756225bc2e04ad00edd50342 *R/oystercatcher.R
16b59d5edc0dece0a3e60f9f548d6485 *R/parse_outfile.R
0efca3f1b1a32a67930b69cd402a1733 *R/read_icv.R
e6a907fa65464e0cddba08fe307549d8 *R/read_tcf.R
ec87d24c2e542b808788cfddeb1d8cdd *R/read_tdf.R
477659e4ca114479f84af8783233bfa0 *R/rtrim-pkg.R
fad69678bb43fef482705a98e0a6f2e1 *R/skylark.R
30edce96fbd7d298a3795da9a994ab60 *R/trim.R
183d75a7d15fe2690b341d5029365fdb *R/trim_estimate.R
a1f3a30a3ab60eeaeb959828a9f9253c *R/trim_gof.R
e6b70935d0d9388649d746518411c40c *R/trim_heatmap.R
e2adafc58de1656bea03e5bd54245662 *R/trim_index.R
99cdbfaa7756c70076ba04c3f775d981 *R/trim_overall.R
231482b33576ffc64a5d9cef5da2a856 *R/trim_post.R
0fcad427fb5cc996b6da0799413cf2a5 *R/trim_refine.R
50b923be183d6a95f4893cf331d0c825 *R/trim_smooth.R
94686a52fdb4aad942ece3c274ee0f4a *R/trim_wald.R
5e9477e323531038e9668495912fd7e0 *R/trim_workhorse.R
4c3fed3ce1789e5e44dca27f45b952db *R/utils.R
b8ba77ee6190747e2ca9ff29d8ad3de5 *build/vignette.rds
2bb305352b4428e5f34fc8c18735ab28 *data/oystercatcher.RData
1157e7556f2650f58e6f9fdb2c27c644 *data/skylark.RData
c255b3042486b48f540ef6c9495ab196 *data/skylark2.RData
230d2a00a30d3f01e76b4ce2b9a570c9 *inst/doc/FAQ.Rmd
683f753fd4a1b6a2721f163fb92bde57 *inst/doc/FAQ.html
13d0b326ea9441c8d4f82de601a2857d *inst/doc/Skylark_example.R
a3732fcf6cbe6c6df335a55ea2cbaae6 *inst/doc/Skylark_example.Rmd
b262d23ffb4c779cfd634ea4a006038d *inst/doc/Skylark_example.html
f777830b5f52a48ff4bc45963c7dd3a4 *inst/doc/TRIM_methods_v2.pdf
42e42aed851bace9a693d3c5f887175c *inst/doc/TRIM_methods_v2.pdf.asis
c72108b9cf95571a44b8fd01f90e5940 *inst/doc/rtrim_2_extensions.R
c45e02b6f3417c7fcf31ed80358d0587 *inst/doc/rtrim_2_extensions.Rmd
8a2f0706ec60ca97018ae525233e1279 *inst/doc/rtrim_2_extensions.html
7739d778e0eaa759ddef2e1ab88f9ad1 *inst/doc/rtrim_confidence_intervals.R
cc06339d250d584c0e314b46f47a3101 *inst/doc/rtrim_confidence_intervals.Rmd
82c10f73872b547b2f8afc28537c38c2 *inst/doc/rtrim_confidence_intervals.html
82e4926ef2ea10f3e6695cdfa6607d0e *inst/doc/rtrim_for_TRIM_users.R
a2d67d4a9e14cc9a94c825d4605d1bfd *inst/doc/rtrim_for_TRIM_users.Rmd
672ffe1a36275a394d9b3c5f5ccc0b4a *inst/doc/rtrim_for_TRIM_users.html
f024e75a97fab3077b8a3633fe767c6f *inst/doc/taming_overdispersion.R
49abdd49e02e2e6caf5ddf00f03f046c *inst/doc/taming_overdispersion.Rmd
5436290254f0f2217968c5568a97e07a *inst/doc/taming_overdispersion.html
022b98ad796a57933624fe09fa5aec48 *man/check_observations.Rd
c51f1e446c2b4ed247ca24e95662ff07 *man/ci_multipliers.Rd
408308a124249ff64b6d2f336ac0f350 *man/coef.trim.Rd
e3092466426e253c8996301f3be534fa *man/confint.trim.Rd
9ae1ff129cc62efc051a7810c1c1219d *man/count_summary.Rd
31387e6b1d70cb9f2b7191b44991aa49 *man/get_coef.Rd
762e039eb3fac42152d1994d18f2ab5f *man/get_estimation_method.Rd
75d6f7521439db14199a5acba63460d7 *man/get_gof.Rd
97dee044b0b3e4af4cf0045a836218dc *man/get_model.Rd
fefde336f6e1c3e9803237eb77cbc8bd *man/get_n_site.Rd
5841e2bb2d5382e4ac671cace9ac904a *man/get_n_time.Rd
8b8558ae36e750ebbcdd35cf9945e0c8 *man/get_overal_imputed_slope.Rd
d155f13f2712952155ee6dd0c03e5ad1 *man/get_time_indices.Rd
aa8831a969e6ae429a19bdbb196c2264 *man/get_time_totals.Rd
9249399c16452615aa7b566ac7cbfb90 *man/get_version.Rd
d2b7c2612d8b89d7a722ad67fcc6401c *man/get_wald.Rd
25eaa28eb1aaa07a2d7dcf2ce26ba0fd *man/gof.Rd
74024fb6ce2fb00c10e8e854029655f4 *man/heatmap.Rd
3427232d8dd87011ff50071a317be8cd *man/index.Rd
46ff9f54d0eb40650cf937cba491fa0a *man/now_what.Rd
660b040ee955e20d2e2d83cadade7e64 *man/overall.Rd
6e9a95ad95250ef443dc76e24c0bc244 *man/overdispersion.Rd
b093b00e8a52f0cebf223963b30fea7f *man/oystercatcher.Rd
d41d398e109159bd55b78a46f8df7f48 *man/plot.trim.index.Rd
ea4e7bf67443f901168a68fb85cfafc5 *man/plot.trim.overall.Rd
e81563c2e7298377ceea881ffa24ba3c *man/plot.trim.smooth.Rd
fd9bdd57a2b95498123c8938f112ad74 *man/plot.trim.totals.Rd
6633ddd3a9acebe3caf92d64ac2e1ff8 *man/print.count.summary.Rd
94c29235d3d5d4420f059b27b34e9e44 *man/print.trim.Rd
3bc7d2a8951decfbb9de3e537f3e2860 *man/print.trim.gof.Rd
34737c44d2d14b733f73dd09f2306014 *man/print.trim.overall.Rd
2f82896438fe16de775eea7c3f4d7bd1 *man/print.trim.wald.Rd
4d91976e322a9a93d12c8d48c74f4366 *man/print.trimcommand.Rd
fd0ed5be998512ee6272961286897c69 *man/read_tcf.Rd
7cb072c02aca788fc5e4fc056afefa99 *man/read_tdf.Rd
0bcc8dc9507947c94ef93ba6ed65403c *man/read_tof.Rd
3fdffe6d72c5206c29e22434a6958211 *man/read_vcv.Rd
05948453a86431dc05b3b9746970444c *man/results.Rd
59327975da7ca20e9f1bc28082b75530 *man/rtrim-package.Rd
d2912c426a43abf6ed1e59ebb0fbfae0 *man/serial_correlation.Rd
45dd368e74f2ee86941856b9372d3af4 *man/set_trim_verbose.Rd
cab652b91c11823bb5994077e6ccee08 *man/skylark.Rd
aaa42ba745f1428f8340278bce93e494 *man/summary.trim.Rd
8dac54a7e6d1b107802e566507ae0f9d *man/summary.trimbatch.Rd
50857d8363158cbdb6f67b97dfa0021b *man/totals.Rd
6c31a8d9d76b6b77d936f5eaa347062e *man/trendlines.Rd
2167bae74bd2c6c4a8f79952b66c1b3b *man/trim.Rd
95d164fd939f2ca6bdf2aa9db9003ade *man/trim_estimate.Rd
67e4ee3ac316cea943e9bd7440e4283b *man/trim_refine.Rd
d19e7de390622caef95f7ee1edaf88e6 *man/trim_workhorse.Rd
1fe2e3a8c1f8ab6b62c2240aed25f13d *man/trimcommand.Rd
28916afdbfcbd574783bc4066250c6c0 *man/vcov.trim.Rd
372b490e980e5b7845fe4f203ba88f00 *man/wald.Rd
4bdef19be19cb39660f919efa0219541 *tests/testthat.R
bd4a9da5cee2acac14b87a250136a568 *tests/testthat/outfiles/skylark-1a.out
35775116201e5ab415520e25ed6b1490 *tests/testthat/outfiles/skylark-1a.tcf
6d011524a58aae5637e5c68ef0a5093a *tests/testthat/outfiles/skylark-1b.out
afbe9ef18598655fe5a3e1f90248074d *tests/testthat/outfiles/skylark-1b.tcf
964fd26b7f2b030cfaec50014634b5df *tests/testthat/outfiles/skylark-1c.out
7827320c5b183681e76ed2d961a0ff35 *tests/testthat/outfiles/skylark-1c.tcf
83ccc60ef3651df864334e2d94d72394 *tests/testthat/outfiles/skylark-1d.out
5b5d7787df79441b48631e968d592ab2 *tests/testthat/outfiles/skylark-1d.tcf
1a60bcd43743b12ec16825d97bfb3e05 *tests/testthat/outfiles/skylark-1e.out
ddcd539b2da64306208cc3eeb3dfda7e *tests/testthat/outfiles/skylark-1e.tcf
a4cc31c551cf7f68fcec814c4ca84aa2 *tests/testthat/outfiles/skylark-1f.out
50d2ae621b61911ec2c5360c5363b616 *tests/testthat/outfiles/skylark-1f.tcf
8c07979bd4554e7d19c2855e57ec08f0 *tests/testthat/outfiles/skylark-2a.out
7e24c11a2b9ea941aa1d94e6c9d3ec36 *tests/testthat/outfiles/skylark-2a.tcf
8058903f73ba8309ca741bd352d8e21a *tests/testthat/outfiles/skylark-2b.out
20e7995d6cf749b741cb2d4049b93320 *tests/testthat/outfiles/skylark-2b.tcf
ad427ca2b8952fe73aaefb8c937f6b6b *tests/testthat/outfiles/skylark-3a.out
b1f8acc472fe83bcd0ca233fc3bd4cc0 *tests/testthat/outfiles/skylark-3a.tcf
dc990d6c8669b20cdbef91a37832a372 *tests/testthat/outfiles/skylark-4a.out
3f5408a6f0ff7578eb769c170747d0bc *tests/testthat/outfiles/skylark-4a.tcf
66fdf61d7823d9ed6e7c8365095ae8e0 *tests/testthat/outfiles/skylark-4b.out
5e65d7d99e6bc31e0d8f7e5c285590e8 *tests/testthat/outfiles/skylark-4b.tcf
569bd581e5d66a858ca715c011db319c *tests/testthat/outfiles/skylark-4c.out
7d080e73035a6c77723fd4c3071638ff *tests/testthat/outfiles/skylark-4c.tcf
d3876271fabb3ca70a9db5b302ae46c8 *tests/testthat/outfiles/skylark-4d.out
548e7833d6c7eacf4a5b76d542f85127 *tests/testthat/outfiles/skylark-4d.tcf
7d42ae1141ba2dee92e4048a36e8fc74 *tests/testthat/outfiles/skylark-4e.out
64d9d216203401114a24555d70a049d0 *tests/testthat/outfiles/skylark-4e.tcf
4c3e906ff2a07dd702f87433c08d316f *tests/testthat/outfiles/skylark-4f.out
402df6c54a09ffbc412d5ca471b77d3b *tests/testthat/outfiles/skylark-4f.tcf
2ef4c7274851d6dcdd53c8a64e1779be *tests/testthat/outfiles/skylark-minimal.tcf
a0b60fc96fc0058a4223dfdabcb509c4 *tests/testthat/outfiles/skylark-model2-f.csv
cd52d392cbbf3583a7b9da2c00dd7e61 *tests/testthat/outfiles/skylark-x1.ocv
afb37670f02162a4e97ebca4dadac7fc *tests/testthat/outfiles/skylark-x1.out
918e5232c9d08d54e937d1c546c9814f *tests/testthat/outfiles/skylark-x1.tcf
e1996bf32b699ccbb32d1de17c3e1ac3 *tests/testthat/outfiles/skylark-x2.out
8d6aa36e643fd07a8e1152a8272dbc7e *tests/testthat/outfiles/skylark-x2.tcf
e320f35fa8a59bfe552cc9f18a624e1b *tests/testthat/outfiles/skylark-x3.out
97a879854a7149c69bd4ce9aabc7ee84 *tests/testthat/outfiles/skylark-x3.tcf
e850bc5595c6c8796d04f9bed41c91ba *tests/testthat/outfiles/skylark.dat
1bfeccdcf38123be273476100fb165e9 *tests/testthat/outfiles/skylark_wt.dat
0156e90ec1182958efdc5b24dd116ad7 *tests/testthat/outfiles/skylark_yr.dat
4e7b7b8aaf216345be65fe688dd9a311 *tests/testthat/outfiles/test_skylark_1a_to_2b.R
d0e2bdf8a9e1a32b43ce27b010a7dfa3 *tests/testthat/test_checks.R
c4cc7c7dd615c875b3bde8627696baed *tests/testthat/test_errors.R
a0fd4a92d4178c0e40f4e1a798c682a7 *tests/testthat/test_tcf.R
e59a55d02c2f80c63f09e911a3e16150 *tests/testthat/test_tdf.R
60a20bfaef711174e78c3fda40887457 *tests/testthat/test_trim.R
8c3117e87f56a3f75cb5736d05475fed *tests/testthat/test_utils.R
8fe1c0cb64215b51e8932d287bd928dd *tests/testthat/testdata/131183.RData
230d2a00a30d3f01e76b4ce2b9a570c9 *vignettes/FAQ.Rmd
a3732fcf6cbe6c6df335a55ea2cbaae6 *vignettes/Skylark_example.Rmd
42e42aed851bace9a693d3c5f887175c *vignettes/TRIM_methods_v2.pdf.asis
225046da22166ea6ce9f57311afab43a *vignettes/UIndex_Oystercatcher_output.RData
c45e02b6f3417c7fcf31ed80358d0587 *vignettes/rtrim_2_extensions.Rmd
cc06339d250d584c0e314b46f47a3101 *vignettes/rtrim_confidence_intervals.Rmd
a2d67d4a9e14cc9a94c825d4605d1bfd *vignettes/rtrim_for_TRIM_users.Rmd
49abdd49e02e2e6caf5ddf00f03f046c *vignettes/taming_overdispersion.Rmd
