8b956d4f2efe8740d296eb781ea8faed *DESCRIPTION
04ceaa8c06bb8cedfe2001445982d9a0 *NAMESPACE
3d20735d4d4fb223bdf2a342349944e5 *R/add-to-simulation.R
162158dc788cd729ef4afc16bd74619a *R/aggregator-class.R
f6cd48944d06a170faebb673291d5587 *R/component-class.R
2998cbae708cee95021f788651079fd6 *R/create.R
f3ed511e43dd744b9861d172faccaa8e *R/draws-class.R
d0a6d3d2f1abec5f1b65e63cdd7c3435 *R/draws.R
31c15177c5676972977ebd6dec579189 *R/evals-class.R
af837c8803e5cd89da2441072a02de41 *R/evaluate.R
072db385370e45561d083cc291af0388 *R/examples.R
98aa8ca0f976212cdacdd743b936d6b3 *R/extended-method-class.R
acf567192d4cf34152f1648d5fe2a8cd *R/get-from-simulation.R
70bdd19989d623948ef5a66416f00cd6 *R/import_from.R
bbe934967bcc13741a7de113c0c1761a *R/load.R
6df0815f4dbc542fff70d4a687ad464d *R/manage.R
42766fc7bd527f469239668be89f9d4f *R/method-class.R
76f0244cba771880465e5d025233a0de *R/method-extension-class.R
de74fc3e42390acf7a4e71574d2d83e8 *R/methods.R
ac6a4abaf58588955973bc90db6fb0c9 *R/metric-class.R
f89d81684a616b48cb6e119a45c88de6 *R/model-class.R
53af172379a503948159ccafdd41e2c6 *R/models.R
b3bcf9b1a08804bef2e7c9b33a65b5d3 *R/output-class.R
7a90d72928fd55ed22489770b72296c0 *R/parallel-draws.R
1d0ccf54c8663f3eae426911e0967466 *R/parallel-methods.R
cbebaf450ff0e262df6d5c248f60a28a *R/parallel.R
816169ca6411d4ba26b80011be037e05 *R/plot_eval.R
a57ff1211f3a400c123bf0678d8f7250 *R/plot_eval_by.R
dbe4d001351ba732fec40afbcf4a5c12 *R/plot_evals.R
6e563799c3ecf02e0ac2a751eed8d804 *R/reference-classes.R
e70ba1c49e8f9da73bc52c27a58b4234 *R/simulation-class.R
bba43e7624802450f0d7da87f0dc2a07 *R/tables.R
06b25ee10debbd110196430080e7cd69 *R/utils.R
1c278154396c8d5c20693d47c60e4f11 *R/zzz.R
c461cc8cdeba7ecdca723be6cf00f9f9 *README.md
cddb1c028a61d87899caf8c150d0bd59 *build/vignette.rds
3eb652cc582aee15000b624b64669a67 *inst/CITATION
a6479155f8acaa1c99a21a86c681fa97 *inst/doc/elastic-net.R
8ba843c4fc10a5dc523750a9a69ef7b9 *inst/doc/elastic-net.Rmd
dbf25b0dd08f255de0ea482083e425e6 *inst/doc/elastic-net.html
3b0e69528deafe3a2967888459a553ce *inst/doc/fdr.R
3e8c861b7154c06d1412aa0f0bc17eff *inst/doc/fdr.Rmd
186ab0331a2f0be7caa082028ba2daf2 *inst/doc/fdr.html
9c863a80922c7ca04f940254c3f93c5f *inst/doc/james-stein.R
397b7aaa4eeac296bad80e9889fdd730 *inst/doc/james-stein.Rmd
f538cf8e305d51135de1c3fa933ddbdb *inst/doc/james-stein.html
c034c0ae9a82037664247feffd19c564 *inst/doc/lasso.R
e3afb6c8f7406389792a8f0d780d20fb *inst/doc/lasso.Rmd
7d840c3b0811f721dad5ba7c8f1b7004 *inst/doc/lasso.html
e1730df6fb32b8cc0e87ace452b67c80 *inst/doc/simulator.R
0ac5b74ad67ebe0af69c5664c64d0835 *inst/doc/simulator.Rmd
d56c875c4fcf63fbae57cbe5ae45e871 *inst/doc/simulator.html
681ca0dc3a43e86ca23ea894657a777f *man/Aggregator-class.Rd
4fa7e8e6d97fa1ee2d87a39fd755e4aa *man/Component.Rd
ed342e737215885a2d6eee59487c6493 *man/Draws-class.Rd
83c62447377f8a36e1145d47c5167160 *man/DrawsRef-class.Rd
8268189f6f3569311398e605c934bde7 *man/Evals-class.Rd
aba2b7eeddd9f72d02067ab46549e19e *man/EvalsRef-class.Rd
83b616e165e88171cf5d651ec04d9c00 *man/ExtendedMethod-class.Rd
f9591c7941348cae11a9036d9614905d *man/Method-class.Rd
5a9732dd2324155d3a3f29339345949e *man/MethodExtension-class.Rd
baabcef1b7b1dc32d1f074fe1ac62d57 *man/Metric-class.Rd
eb27f4204ca3c1f6720316069bab7af7 *man/Model-class.Rd
1d4746f12e08b727378aad1fbdb5ce84 *man/ModelRef-class.Rd
c028dd8006a9046ea54d617802eec216 *man/Output-class.Rd
f2186da32f675d926376ddd9b355f210 *man/OutputRef-class.Rd
2ccfe04a2cc624168751519b72a8b9be *man/Simulation.Rd
0afe5d29c39d74d86820139cd7439833 *man/add.Rd
a2b49ab057ca09fb331361bc5e67c3d1 *man/add_bold.Rd
7c71f69ef6275fbfa14e5b1fe9d359f4 *man/add_dref_to_list.Rd
7cc7bd5dd07ce482e06e6a206a8b950d *man/add_eref_to_list.Rd
cf893c41a6d3ebeff437ffc67e17bf6c *man/add_oref_to_list.Rd
db8adf90510e163e9e07128d3bb9556c *man/aggregate_evals.Rd
7071c337db9271df410bca5abfe82005 *man/as.data.frame.Evals.Rd
fb4bb42dee5fd18529f144b122f0983c *man/as.data.frame.Model.Rd
c727236ca005d6247c4998a08727c9e1 *man/as.data.frame.listofEvals.Rd
847f3849a288e068b26d82f685ad72cc *man/as.data.frame.listofModels.Rd
6aceaae75e6a3249733bc5b0af8af8e9 *man/cash-Model-method.Rd
0e2fde8a9c64c5d74503bc1e6a8dbd2a *man/catsim.Rd
edc824a40b67aa91fdddb2fd4b2d150e *man/create.Rd
ebf9610023b05958d4ed7eec0be538cf *man/describe.Rd
9138dccb177e51de5ec3467753860bd3 *man/do_in_parallel.Rd
b9d52254f4169b87a51c7c584c73b355 *man/draws.Rd
a69aeef4e09df2394bf2d2fe6644fa26 *man/evals.Rd
e7e55e1594ee128a0af1f05e3d18a407 *man/evaluate.Rd
073dd58e5b0b1a3a769f166a6462edf4 *man/evaluate_internal.Rd
ed787a87ee36083945c4359046d30696 *man/evaluate_single.Rd
6e3bed1b811a4de67d32531965216a02 *man/figures/simulator-hex3.png
1545c70a4f48ed8e338083d2238a4bc2 *man/generate_model.Rd
bdf7c1bd09550e208833052e2698d991 *man/get_contents.Rd
f8443454bf733af6bf06b192cbb81008 *man/get_files_not_in_simulations.Rd
89eb6662b7ea46956fb673bbb265648c *man/get_model_indices.Rd
46781497b275aa563d2151a9cd455064 *man/get_relative_path.Rd
c6f0109a525d8e669689be2597cbd343 *man/get_simulation_with_all_files.Rd
d83d41f4f0ec67a7fea96df4a642a4b8 *man/ggplot_eval.Rd
8d809830e6e5824ee18190273e24778d *man/grapes-greater-than-grapes.Rd
bbd23455754ee37638dd3de362097d72 *man/load-DrawsRef-method.Rd
52f2282aadeec61b5c8660f72d097dab *man/load-EvalsRef-method.Rd
68d64dc9b2de84cdc1240f7303284ce4 *man/load-ModelRef-method.Rd
f677359033259fb52a8cc7f9c537117f *man/load-OutputRef-method.Rd
587b9be34def0e3b1e01e9901269c01e *man/load-list-method.Rd
2fe63c46a169757ae3bb43fc3e8bab01 *man/load_draws.Rd
6e7160c0274b04d477de16705c710c45 *man/load_evals.Rd
563b4a87f5df37bfa858e5c5a9756325 *man/load_libraries_on_cluster.Rd
ece9e90f3be26bf2cfd1ff9752cd667c *man/load_model.Rd
6afab81b3ebe38b0386b21eb5ab476fc *man/load_outputs.Rd
8ea01da26e9565ac0b2e1704ece5788e *man/load_simulation.Rd
fdeaf5650a98ae877623fca503dbd772 *man/make_my_example_model.Rd
64c274947ace6a144b7c6e3a296f51c1 *man/memory_as_string.Rd
8a7f5ae72de97b976bc7ffa1a2dacfb6 *man/model.Rd
7bde4c4654e130b506728c765a5ed98c *man/model_names.Rd
ab6a966bd3a307ace46496d2fec2285d *man/models_as_data.frame.Rd
6afae4bb087be174b57452c543fe4fd3 *man/my_example_loss.Rd
fa878d535cf4c5a694ea88427445f172 *man/my_example_method.Rd
2f0931bf5dec6178e7f1ec21c45c5a98 *man/new_aggregator.Rd
27e80aad98f43fe33aec029258090a62 *man/new_extended_method.Rd
71f3664c37ec66345db99ab71510a9f6 *man/new_method.Rd
28ed84df8315a8c41870502c25f8dfb4 *man/new_method_extension.Rd
788cae63a32899e4b5e842ea84da06ca *man/new_metric.Rd
55ddc712aa2102403cd25bd95efecb5d *man/new_model.Rd
75a609c50521322359ddd21b65ae2048 *man/new_simulation.Rd
948d2150e8bc82924cb37ccf97ef6f40 *man/output.Rd
6e9e819b02e2fc2439a9beb6e3ae3832 *man/outputs_or_evals.Rd
94ace7b01dee28b0c0d053df94067d4e *man/plot_eval.Rd
cc7ca9a22d9ab98506e9b4313790afc8 *man/plot_eval_by.Rd
e28f1af16a38758f2bdd735170e5553c *man/plot_evals.Rd
af2fac42dad29e4abdbe8c6a7f368f36 *man/plus-ExtendedMethod-MethodExtension-method.Rd
b03938db9ad9d4ec0693ac1ea6891b83 *man/plus-Method-MethodExtension-method.Rd
0e0d1fbb10071502d5bc96b3a5252eae *man/plus-list-MethodExtension-method.Rd
86de83a0ababdd10e84594f4a8a7ad0d *man/recycle.Rd
b788fd26a9123bff8dbd6a2af0fad06b *man/relabel.Rd
8c198bcc1decab30923d9c3b270f4e76 *man/rename.Rd
a1ec4741e4e396b18e3e1b06d2b432bd *man/run_extendedmethod_single.Rd
efc8221c02030fe603afc8148e8171e2 *man/run_extmethod_parallel.Rd
d870cc5c6474fe225d5910ce893a3991 *man/run_method.Rd
fef7b4db02de30f32aee170d6877e45c *man/run_method_parallel.Rd
d07c33ec6ccf7e23283148a04d8b5e46 *man/run_method_single.Rd
786be4732f5625cde5f411d2292d4482 *man/save_simulation.Rd
61d5152689d7129c795a63d735efa705 *man/simulate_from_model.Rd
c26e9496e4e65605d3df30fd04c702ea *man/simulate_from_model_single.Rd
566065cb294ad98f55a13b37dc7d4795 *man/simulate_parallel.Rd
0397717e5412e3668790df3f76f66204 *man/subset_evals.Rd
41fb6d7f39dfb0d7a7c235bc64d019e5 *man/subset_models.Rd
ceb6a37e39aa4d381b51a2492105835d *man/subset_simulation.Rd
96f644b1aac3eaf44de2631b101e45c0 *man/tabulate_eval.Rd
b5b2ec386be889119ed54ea8b15e2018 *tests/testthat.R
6d8c761ed882f67b9790e1fc4f0ab830 *tests/testthat/test-create.R
0e2bef2d063057cf383a233014d02863 *tests/testthat/test-draws.R
5bc571dfcafdf55204eb7ecbe7919e5b *tests/testthat/test-evaluate.R
e96542f72326087ec60e9b2cc554361b *tests/testthat/test-method-extension.R
4aee35cd657c1ad2052db31a29f7ffbe *tests/testthat/test-method.R
14f9e41f99e7123c128dc56046b499cd *tests/testthat/test-models.R
cff7745c123b93010d98b4fab234b6a8 *tests/testthat/test-parallel.R
58fd28a5c50e2a2cfd5e01ae460b7246 *tests/testthat/test-regex.R
f1252b4e2f4eecb082374675e3afda79 *tests/testthat/test-simulation.R
862fece31d358400de4e579b80de0a7c *tests/testthat/test-simulator.files.R
9a8955b03e1f0536e836de3baba89a61 *tests/testthat/test-table.R
47cc86bc76dae5b03a44bcc2c88559a6 *tests/testthat/test-utils.R
8ba843c4fc10a5dc523750a9a69ef7b9 *vignettes/elastic-net.Rmd
ddd0b7e109d10827f6af16e759655a1b *vignettes/elastic-net/eval_functions.R
3fc8b9ca451141a9b2b03ae58075d26d *vignettes/elastic-net/main.R
1cae1c60de8a95a5642111b133d9e3a5 *vignettes/elastic-net/method_functions.R
7c0dbf5e799b2c0751bcf5b1fcc384d3 *vignettes/elastic-net/model_functions.R
d16e0049f2fdc98bd73020283ac00a32 *vignettes/false-discovery-rate/eval_functions.R
48e4fd0c19afba713465a0e7edd9955d *vignettes/false-discovery-rate/main.R
01c6d79c3751e4ff4cbaecd35c75f324 *vignettes/false-discovery-rate/method_functions.R
00b023c868141faf7cb08b5f656d5844 *vignettes/false-discovery-rate/model_functions.R
3e8c861b7154c06d1412aa0f0bc17eff *vignettes/fdr.Rmd
397b7aaa4eeac296bad80e9889fdd730 *vignettes/james-stein.Rmd
910ec6dbd6d8311190ed7926aaf6aa41 *vignettes/james-stein/eval_functions.R
f50125a4532520d3dde8c350d27ebf3d *vignettes/james-stein/main.R
60b40122ac8c98c68faee7b5814f672b *vignettes/james-stein/method_functions.R
a3cdc63362ac2c2d5b65f5d6bdd45498 *vignettes/james-stein/model_functions.R
e3afb6c8f7406389792a8f0d780d20fb *vignettes/lasso.Rmd
3f7399009beee51fafc55743bb10265a *vignettes/lasso/eval_functions.R
2a2c2c01434c2f6dc6791c3b3cfcc5d1 *vignettes/lasso/main.R
93495c3cbff466a276de588f02b151ca *vignettes/lasso/method_functions.R
2eeddc9acdc55ed4f349f0ca5921e4ea *vignettes/lasso/model_functions.R
0ac5b74ad67ebe0af69c5664c64d0835 *vignettes/simulator.Rmd
