Last updated on 2025-10-08 09:49:39 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.50 | 260.74 | 274.24 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.51 | 260.19 | 270.70 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.26 | 285.36 | 300.62 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 172.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 244.00 | 267.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/135s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.042, elapsed: 1.595 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.075, system: 0.194, elapsed: 11.674 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.022, elapsed: 0.358 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.885, system: 0.261, elapsed: 7.804 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.464 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.299, system: 0.550, elapsed: 22.609 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.631, system: 0.070, elapsed: 3.714 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.324, system: 0.260, elapsed: 14.222 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.017, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.939, system: 0.253, elapsed: 6.761 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.008, elapsed: 0.321 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.789, system: 0.637, elapsed: 26.405 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.749, system: 0.071, elapsed: 2.986 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.237, system: 0.197, elapsed: 14.682 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.756, system: 0.224, elapsed: 5.181 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.173 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.175, system: 0.243, elapsed: 1.016 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.878, system: 0.782, elapsed: 25.245 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.742, system: 0.096, elapsed: 2.719 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.488, system: 0.368, elapsed: 13.314 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.019, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.854, system: 0.237, elapsed: 7.872 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.518 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.305, system: 0.445, elapsed: 27.528 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.401, system: 1.217, elapsed: 53.565 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.467, system: 0.043, elapsed: 1.974 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.840, system: 0.100, elapsed: 11.110 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.208 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.708, system: 0.243, elapsed: 5.332 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.005, elapsed: 0.183 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.892, system: 0.424, elapsed: 19.448 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.049, elapsed: 1.842 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.923, system: 0.199, elapsed: 10.923 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.018, elapsed: 0.229 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.828, system: 0.272, elapsed: 4.961 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.008, elapsed: 0.213 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.120, system: 0.576, elapsed: 18.771 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.638, system: 0.064, elapsed: 2.260 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.060, system: 0.250, elapsed: 11.839 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.015, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.624, system: 0.225, elapsed: 6.181 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.015, elapsed: 0.459 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.067, system: 0.238, elapsed: 1.584 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.357, system: 0.842, elapsed: 23.546 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.049, elapsed: 3.216 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.960, system: 0.141, elapsed: 12.806 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.011, elapsed: 0.227 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.737, system: 0.264, elapsed: 6.186 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.008, elapsed: 0.345 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.257, system: 0.666, elapsed: 21.076 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.437, system: 1.170, elapsed: 45.048 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64