Last updated on 2025-11-01 08:49:47 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 244.69 | 257.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.00 | 205.69 | 215.69 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 192.00 | 204.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 168.00 | 179.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.059, elapsed: 2.386 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.674, system: 0.248, elapsed: 14.276 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.019, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.131, system: 0.297, elapsed: 5.865 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.008, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.366, system: 0.663, elapsed: 23.904 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.687, system: 0.080, elapsed: 2.473 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.758, system: 0.268, elapsed: 18.358 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.015, elapsed: 0.478 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.173, system: 0.274, elapsed: 7.080 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.011, elapsed: 0.300 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.549, system: 0.680, elapsed: 29.798 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.832, system: 0.082, elapsed: 2.717 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.866, system: 0.354, elapsed: 14.453 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.019, elapsed: 0.330 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.112, system: 0.312, elapsed: 5.559 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.006, elapsed: 0.189 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.307, system: 0.289, elapsed: 1.334 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.135, system: 1.096, elapsed: 25.446 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.793, system: 0.108, elapsed: 2.507 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.825, system: 0.306, elapsed: 17.556 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.017, elapsed: 0.787 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.020, system: 0.201, elapsed: 12.509 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.436 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.947, system: 0.504, elapsed: 24.293 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.606, system: 1.184, elapsed: 59.705 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.640, system: 0.057, elapsed: 2.207 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.510, system: 0.169, elapsed: 13.089 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.019, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.937, system: 0.276, elapsed: 5.945 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.009, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.014, system: 0.558, elapsed: 22.530 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.769, system: 0.075, elapsed: 2.568 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.601, system: 0.251, elapsed: 14.388 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.017, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.047, system: 0.283, elapsed: 5.832 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.010, elapsed: 0.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.343, system: 0.683, elapsed: 24.134 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.794, system: 0.076, elapsed: 2.613 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.834, system: 0.370, elapsed: 13.743 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.018, elapsed: 0.261 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.872, system: 0.288, elapsed: 4.980 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.019, elapsed: 0.221 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.099, system: 0.259, elapsed: 0.873 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.606, system: 1.078, elapsed: 23.684 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.051, elapsed: 1.708 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.580, system: 0.242, elapsed: 14.255 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.015, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.784, system: 0.199, elapsed: 5.361 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.230 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.609, system: 0.504, elapsed: 17.680 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.547, system: 1.046, elapsed: 40.385 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64