Last updated on 2025-12-05 09:50:04 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.1 | 29.61 | 295.68 | 325.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 19.63 | 194.44 | 214.07 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.1 | 76.00 | 441.48 | 517.48 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.1 | 70.00 | 441.44 | 511.44 | OK | |
| r-devel-windows-x86_64 | 1.0.1 | 31.00 | 233.00 | 264.00 | OK | |
| r-patched-linux-x86_64 | 1.0.1 | 29.94 | 280.89 | 310.83 | OK | |
| r-release-linux-x86_64 | 1.0.1 | 31.73 | 281.28 | 313.01 | OK | |
| r-release-macos-arm64 | 1.0.1 | OK | ||||
| r-release-macos-x86_64 | 1.0.1 | 47.00 | 247.00 | 294.00 | OK | |
| r-release-windows-x86_64 | 1.0.1 | 29.00 | 229.00 | 258.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.1 | OK | ||||
| r-oldrel-macos-x86_64 | 1.0.1 | 32.00 | 280.00 | 312.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.1 | 41.00 | 309.00 | 350.00 | ERROR |
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in 'rLakeHabitat-Ex.R' failed
The error most likely occurred in:
> ### Name: crossValidate
> ### Title: Cross Validate Interpolated Bathymetry
> ### Aliases: crossValidate
>
> ### ** Examples
>
> #load example outline
> outline <- terra::vect(system.file("extdata", "example_outline.shp", package = 'rLakeHabitat'))
Warning: PROJ: proj_identify: Cannot find proj.db (GDAL error 1)
Warning: [vect] Z coordinates ignored
> #load example xyz data
> data <- read.csv(system.file("extdata", "example_depths.csv", package = 'rLakeHabitat'))
> #run function
> crossValidate(outline, data, "x", "y", "z", zeros = FALSE, separation = 10, k = 5, crsUnit = "dd",
+ res = 50, method = "IDW", nmax = 4, idp = 1.5)
Warning: PROJ: proj_create_from_database: Cannot find proj.db (GDAL error 1)
Error: [rast] empty srs
Execution halted
Flavor: r-oldrel-windows-x86_64
Version: 1.0.1
Check: tests
Result: ERROR
Running 'testthat.R' [21s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(rLakeHabitat)
>
> test_check("rLakeHabitat")
Saving _problems/test-crossValidate-52.R
Saving _problems/test-interpBathy-51.R
Saving _problems/test-rarify-32.R
[ FAIL 3 | WARN 9 | SKIP 0 | PASS 209 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-crossValidate.R:52:3'): crossValidate output check ─────────────
Error: [rast] empty srs
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-crossValidate.R:52:3
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─rLakeHabitat::crossValidate(...)
5. └─rLakeHabitat::interpBathy(...)
6. └─rLakeHabitat (local) get_res(outline, res, crsUnits)
7. ├─terra::crs("EPSG:32601")
8. └─terra::crs("EPSG:32601")
9. └─terra (local) .local(x, ...)
10. ├─terra::rast(crs = x)
11. └─terra::rast(crs = x)
12. └─terra (local) .local(x = x, ...)
13. └─terra:::new_rast(...)
14. └─terra:::messages(r, "rast")
15. └─terra:::error(f, x@pntr$getError())
── Error ('test-interpBathy.R:51:3'): interpBathy output check ─────────────────
Error: [rast] empty srs
Backtrace:
▆
1. ├─testthat::expect_s4_class(...) at test-interpBathy.R:51:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─rLakeHabitat::interpBathy(...)
5. └─rLakeHabitat (local) get_res(outline, res, crsUnits)
6. ├─terra::crs("EPSG:32601")
7. └─terra::crs("EPSG:32601")
8. └─terra (local) .local(x, ...)
9. ├─terra::rast(crs = x)
10. └─terra::rast(crs = x)
11. └─terra (local) .local(x = x, ...)
12. └─terra:::new_rast(...)
13. └─terra:::messages(r, "rast")
14. └─terra:::error(f, x@pntr$getError())
── Error ('test-rarify.R:32:3'): rarify output check ───────────────────────────
Error: [rast] empty srs
Backtrace:
▆
1. ├─testthat::expect_s3_class(...) at test-rarify.R:32:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─rLakeHabitat::rarify(hull, dat, "x", "y", "z", res = 100)
5. └─rLakeHabitat (local) get_res(outline, res, crsUnits)
6. ├─terra::crs("EPSG:32601")
7. └─terra::crs("EPSG:32601")
8. └─terra (local) .local(x, ...)
9. ├─terra::rast(crs = x)
10. └─terra::rast(crs = x)
11. └─terra (local) .local(x = x, ...)
12. └─terra:::new_rast(...)
13. └─terra:::messages(r, "rast")
14. └─terra:::error(f, x@pntr$getError())
[ FAIL 3 | WARN 9 | SKIP 0 | PASS 209 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64