healthdb: Working with Healthcare Databases

A system for identifying diseases or events from healthcare databases and preparing data for epidemiological studies. It includes capabilities not supported by 'SQL', such as matching strings by 'stringr' style regular expressions, and can compute comorbidity scores (Quan et al. (2005) <doi:10.1097/01.mlr.0000182534.19832.83>) directly on a database server. The implementation is based on 'dbplyr' with full 'tidyverse' compatibility.

Version: 0.4.1
Imports: clock, data.table, dbplyr (≥ 2.5.0), dplyr (≥ 1.1.0), glue, lubridate, magrittr, purrr, rlang, stringr (≥ 1.5.0), tidyr
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), withr, RSQLite
Published: 2025-04-05
DOI: 10.32614/CRAN.package.healthdb
Author: Kevin Hu ORCID iD [aut, cre, cph]
Maintainer: Kevin Hu <kevin.hu at bccdc.ca>
BugReports: https://github.com/KevinHzq/healthdb/issues
License: MIT + file LICENSE
URL: https://github.com/KevinHzq/healthdb, https://kevinhzq.github.io/healthdb/
NeedsCompilation: no
Materials: README, NEWS
CRAN checks: healthdb results

Documentation:

Reference manual: healthdb.html , healthdb.pdf
Vignettes: Introduction to healthdb (source, R code)

Downloads:

Package source: healthdb_0.4.1.tar.gz
Windows binaries: r-devel: healthdb_0.4.1.zip, r-release: healthdb_0.4.1.zip, r-oldrel: healthdb_0.4.1.zip
macOS binaries: r-release (arm64): healthdb_0.4.1.tgz, r-oldrel (arm64): healthdb_0.4.1.tgz, r-release (x86_64): healthdb_0.4.1.tgz, r-oldrel (x86_64): healthdb_0.4.1.tgz
Old sources: healthdb archive

Linking:

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