signalHsmm: Predict Presence of Signal Peptides

Predicts the presence of signal peptides in eukaryotic protein using hidden semi-Markov models. The implemented algorithm can be accessed from both the command line and GUI.

Version: 1.5
Depends: R (≥ 3.0.0)
Imports: graphics, seqinr, shiny, stats, utils
LinkingTo: Rcpp
Suggests: DT, rmarkdown, shinythemes
Published: 2018-11-15
DOI: 10.32614/CRAN.package.signalHsmm
Author: Michal Burdukiewicz ORCID iD [cre, aut], Piotr Sobczyk [aut], Jaroslaw Chilimoniuk ORCID iD [ctb]
Maintainer: Michal Burdukiewicz <michalburdukiewicz at gmail.com>
License: GPL-3
URL: https://github.com/michbur/signalhsmm
NeedsCompilation: yes
Citation: signalHsmm citation info
Materials: README, ChangeLog
CRAN checks: signalHsmm results

Documentation:

Reference manual: signalHsmm.html , signalHsmm.pdf

Downloads:

Package source: signalHsmm_1.5.tar.gz
Windows binaries: r-devel: signalHsmm_1.5.zip, r-release: signalHsmm_1.5.zip, r-oldrel: signalHsmm_1.5.zip
macOS binaries: r-release (arm64): signalHsmm_1.5.tgz, r-oldrel (arm64): signalHsmm_1.5.tgz, r-release (x86_64): signalHsmm_1.5.tgz, r-oldrel (x86_64): signalHsmm_1.5.tgz
Old sources: signalHsmm archive

Reverse dependencies:

Reverse suggests: factR

Linking:

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