For Multi Parent Populations (MPP) Identity By Descend (IBD)
probabilities are computed using Hidden Markov Models. These probabilities
are then used in a mixed model approach for QTL Mapping as described in
Li et al. (<doi:10.1007/s00122-021-03919-7>).
| Version: |
1.0.4 |
| Depends: |
R (≥ 3.6), statgenGWAS (≥ 1.0.9) |
| Imports: |
data.table, foreach, ggplot2, gridExtra, LMMsolver (≥ 1.0.5), rlang, scales, spam, statgenIBD (≥ 1.0.8) |
| Suggests: |
rmarkdown, knitr, tinytest |
| Published: |
2025-02-11 |
| DOI: |
10.32614/CRAN.package.statgenMPP |
| Author: |
Martin Boer  [aut],
Wenhao Li [aut],
Bart-Jan van Rossum
[aut, cre],
Fred van Eeuwijk
[ctb] |
| Maintainer: |
Bart-Jan van Rossum <bart-jan.vanrossum at wur.nl> |
| BugReports: |
https://github.com/Biometris/statgenMPP/issues |
| License: |
GPL (≥ 3) |
| URL: |
https://biometris.github.io/statgenMPP/index.html,
https://github.com/Biometris/statgenMPP/ |
| NeedsCompilation: |
no |
| Citation: |
statgenMPP citation info |
| Materials: |
README, NEWS |
| In views: |
Agriculture |
| CRAN checks: |
statgenMPP results |