visreg is an R package for displaying the results of
a fitted model in terms of how a predictor variable x
affects an outcome y. The implementation of
visreg takes advantage of object-oriented programming
in R, meaning that it works with virtually any type of formula-based
model in R provided that the model class provides a
predict() method: lm, glm,
gam, rlm, nlme,
lmer, coxph, svm,
randomForest and many more.
To install the latest release version from CRAN:
install.packages("visreg")To install the latest development version from GitHub:
remotes::install_github("pbreheny/visreg")The basic usage is that you fit a model, for example:
fit <- lm(Ozone ~ Solar.R + Wind + Temp, data=airquality)and then you pass it to visreg:
visreg(fit, "Wind")
A more complex example, which uses the gam() function
from mgcv:
airquality$Heat <- cut(airquality$Temp, 3, labels=c("Cool", "Mild", "Hot"))
fit <- gam(Ozone ~ s(Wind, by=Heat, sp=0.1), data=airquality)
visreg(fit, "Wind", "Heat", gg=TRUE, ylab="Ozone")
For more information on visreg syntax and how to use it, see:
The website focuses more on syntax, options, and user interface, while the paper goes into more depth regarding the statistical details.